Python Module Index

s


	s
	`schrodinger`
	`schrodinger.active_learning`
	`schrodinger.active_learning.al_driver`
	`schrodinger.active_learning.al_node`
	`schrodinger.active_learning.al_report`
	`schrodinger.active_learning.al_utils`
	`schrodinger.active_learning.fake_nodes`
	`schrodinger.active_learning.mq_backend`
	`schrodinger.active_learning.mq_driver`
	`schrodinger.active_learning.mq_worker`
	`schrodinger.active_learning.scaffold_methods`
	`schrodinger.adapter`
	`schrodinger.analysis`
	`schrodinger.analysis.enrichment`
	`schrodinger.analysis.enrichment.calculator`
	`schrodinger.analysis.enrichment.enrichment_input`
	`schrodinger.analysis.enrichment.metrics`
	`schrodinger.analysis.enrichment.plotter`
	`schrodinger.analysis.reaction`
	`schrodinger.analysis.substructure`
	`schrodinger.analysis.transformations`
	`schrodinger.analysis.visanalysis`
	`schrodinger.analysis.visanalysis.vdaxis`
	`schrodinger.analysis.visanalysis.vdcoordinateframe`
	`schrodinger.analysis.visanalysis.vdexception`
	`schrodinger.analysis.visanalysis.volumedata`
	`schrodinger.analysis.visanalysis.volumedataio`
	`schrodinger.analysis.visanalysis.volumedatastructureutils`
	`schrodinger.analysis.visanalysis.volumedatautils`
	`schrodinger.application`
	`schrodinger.application.aacg`
	`schrodinger.application.aacg.utils`
	`schrodinger.application.bb_database`
	`schrodinger.application.bb_database.bb_arg_utils`
	`schrodinger.application.bb_database.bb_job_utils`
	`schrodinger.application.bb_database.bb_task_utils`
	`schrodinger.application.bindingsite`
	`schrodinger.application.bindingsite.atomtyping`
	`schrodinger.application.bindingsite.cavutils`
	`schrodinger.application.bindingsite.common`
	`schrodinger.application.bindingsite.intfield`
	`schrodinger.application.bindingsite.schema`
	`schrodinger.application.bioluminate`
	`schrodinger.application.bioluminate.actions`
	`schrodinger.application.bioluminate.actions.configs`
	`schrodinger.application.bioluminate.actions.factory`
	`schrodinger.application.bioluminate.actions.icons`
	`schrodinger.application.bioluminate.actions.icons_rc`
	`schrodinger.application.bioluminate.anarci`
	`schrodinger.application.bioluminate.anarci.anarci_adapter`
	`schrodinger.application.bioluminate.anarci.annotate`
	`schrodinger.application.bioluminate.anarci.loop_ranges`
	`schrodinger.application.bioluminate.antibody`
	`schrodinger.application.bioluminate.antibody.annotate`
	`schrodinger.application.bioluminate.antibody.annotation_constants`
	`schrodinger.application.bioluminate.antibody.antibody_homology_report_writer`
	`schrodinger.application.bioluminate.antibody.antibody_modeling_yaml`
	`schrodinger.application.bioluminate.antibody.assembly`
	`schrodinger.application.bioluminate.antibody.assembly_yaml`
	`schrodinger.application.bioluminate.antibody.grafting`
	`schrodinger.application.bioluminate.antibody.io`
	`schrodinger.application.bioluminate.antibody.io.csv_reader`
	`schrodinger.application.bioluminate.antibody.management`
	`schrodinger.application.bioluminate.antibody.models`
	`schrodinger.application.bioluminate.antibody.scaffold_search`
	`schrodinger.application.bioluminate.antibody.search_results_table`
	`schrodinger.application.bioluminate.antibody.sequence_indexer`
	`schrodinger.application.bioluminate.antibody.utils`
	`schrodinger.application.bioluminate.bwidgets`
	`schrodinger.application.bioluminate.classify`
	`schrodinger.application.bioluminate.drivers`
	`schrodinger.application.bioluminate.drivers.io`
	`schrodinger.application.bioluminate.epitope`
	`schrodinger.application.bioluminate.epitope.driver`
	`schrodinger.application.bioluminate.epitope.psc_workflow`
	`schrodinger.application.bioluminate.epitope.utils`
	`schrodinger.application.bioluminate.epitope.utils.esc_utils`
	`schrodinger.application.bioluminate.escomp`
	`schrodinger.application.bioluminate.immunebuilder`
	`schrodinger.application.bioluminate.immunebuilder.immunebuilder_adapter`
	`schrodinger.application.bioluminate.interaction_calculator`
	`schrodinger.application.bioluminate.met_oxidation`
	`schrodinger.application.bioluminate.met_oxidation.hmc_sim_runner`
	`schrodinger.application.bioluminate.met_oxidation.md_sim_runner`
	`schrodinger.application.bioluminate.methionine_oxidation`
	`schrodinger.application.bioluminate.mhc`
	`schrodinger.application.bioluminate.mhc.docking_angles`
	`schrodinger.application.bioluminate.mutation`
	`schrodinger.application.bioluminate.nucleic`
	`schrodinger.application.bioluminate.nucleic.constants`
	`schrodinger.application.bioluminate.nucleic.mutator`
	`schrodinger.application.bioluminate.patch_utils`
	`schrodinger.application.bioluminate.patch_utils.msurfext`
	`schrodinger.application.bioluminate.patch_utils.patch_finder`
	`schrodinger.application.bioluminate.patch_utils.pre_analyze`
	`schrodinger.application.bioluminate.patch_utils.settings`
	`schrodinger.application.bioluminate.peptide_sar`
	`schrodinger.application.bioluminate.peptide_sar.encode`
	`schrodinger.application.bioluminate.peptide_sar.io`
	`schrodinger.application.bioluminate.peptide_sar.label`
	`schrodinger.application.bioluminate.peptide_sar.sar`
	`schrodinger.application.bioluminate.peptide_sar.statistics`
	`schrodinger.application.bioluminate.pml_menus`
	`schrodinger.application.bioluminate.pose_filtering`
	`schrodinger.application.bioluminate.pose_filtering.csv_filter`
	`schrodinger.application.bioluminate.pose_filtering.hdx_analysis`
	`schrodinger.application.bioluminate.pose_filtering.hdx_calc`
	`schrodinger.application.bioluminate.pose_filtering.hdx_io`
	`schrodinger.application.bioluminate.pose_filtering.operators`
	`schrodinger.application.bioluminate.pose_filtering.residue_filter`
	`schrodinger.application.bioluminate.pose_filtering.test`
	`schrodinger.application.bioluminate.propfilter`
	`schrodinger.application.bioluminate.propfilter_ui`
	`schrodinger.application.bioluminate.propka_parse`
	`schrodinger.application.bioluminate.protein`
	`schrodinger.application.bioluminate.protein.mutator`
	`schrodinger.application.bioluminate.protein.protein`
	`schrodinger.application.bioluminate.protein.utils`
	`schrodinger.application.bioluminate.protein_interaction`
	`schrodinger.application.bioluminate.protein_interaction.calculate`
	`schrodinger.application.bioluminate.protein_interaction.tasks`
	`schrodinger.application.bioluminate.protein_interaction.utils`
	`schrodinger.application.bioluminate.protein_protein_docking_shared`
	`schrodinger.application.bioluminate.protein_report_widget`
	`schrodinger.application.bioluminate.protein_structure_quality`
	`schrodinger.application.bioluminate.protein_structure_quality_ui`
	`schrodinger.application.bioluminate.reactive_residues`
	`schrodinger.application.bioluminate.residue_scanning`
	`schrodinger.application.bioluminate.residue_scanning.properties`
	`schrodinger.application.bioluminate.run_propka`
	`schrodinger.application.bioluminate.sliderchart`
	`schrodinger.application.bioluminate.ssv`
	`schrodinger.application.bioluminate.ssv.toolbars`
	`schrodinger.application.bioluminate.ssv.viewer`
	`schrodinger.application.bioluminate.surfcomp`
	`schrodinger.application.bioluminate.tcr`
	`schrodinger.application.bioluminate.tcr.annotate`
	`schrodinger.application.bioluminate.update_germline_db`
	`schrodinger.application.bioluminate.update_germline_db.translate_db`
	`schrodinger.application.bioluminate.validate_imported_modules`
	`schrodinger.application.bioluminate.workspacelabeler`
	`schrodinger.application.canvas`
	`schrodinger.application.canvas.base`
	`schrodinger.application.canvas.cluster`
	`schrodinger.application.canvas.clustergui`
	`schrodinger.application.canvas.fingerprint`
	`schrodinger.application.canvas.fingerprintgui`
	`schrodinger.application.canvas.r_group`
	`schrodinger.application.canvas.r_group_dee`
	`schrodinger.application.canvas.similarity`
	`schrodinger.application.canvas.similaritygui`
	`schrodinger.application.canvas.topo_descriptors`
	`schrodinger.application.canvas.utils`
	`schrodinger.application.combiglide`
	`schrodinger.application.combiglide.connection_storage`
	`schrodinger.application.combiglide.corehop`
	`schrodinger.application.combiglide.packages`
	`schrodinger.application.combiglide.utils`
	`schrodinger.application.combinatorial_diversity`
	`schrodinger.application.combinatorial_diversity.diversity_fingerprinter`
	`schrodinger.application.combinatorial_diversity.diversity_selector`
	`schrodinger.application.combinatorial_diversity.diversity_splitter`
	`schrodinger.application.combinatorial_diversity.driver_utils`
	`schrodinger.application.combinatorial_diversity.splitter_utils`
	`schrodinger.application.combinatorial_explorer`
	`schrodinger.application.combinatorial_explorer.driver_utils`
	`schrodinger.application.combinatorial_explorer.route_screener`
	`schrodinger.application.combinatorial_screen`
	`schrodinger.application.combinatorial_screen.combinatorial_screener`
	`schrodinger.application.combinatorial_screen.driver_utils`
	`schrodinger.application.combinatorial_screen.fingerprint_utils`
	`schrodinger.application.dendrogram`
	`schrodinger.application.dendrogram.core_class`
	`schrodinger.application.dendrogram.gradientSelector`
	`schrodinger.application.dendrogram.proteinDendrogram`
	`schrodinger.application.dendrogram.randTestSet`
	`schrodinger.application.desmond`
	`schrodinger.application.desmond.arkdb`
	`schrodinger.application.desmond.bennett`
	`schrodinger.application.desmond.cms`
	`schrodinger.application.desmond.cms_utils`
	`schrodinger.application.desmond.cns_io`
	`schrodinger.application.desmond.measurement`
	`schrodinger.application.desmond.packages`
	`schrodinger.application.desmond.packages.analysis`
	`schrodinger.application.desmond.packages.destro`
	`schrodinger.application.desmond.packages.msys`
	`schrodinger.application.desmond.packages.msys.molfile`
	`schrodinger.application.desmond.packages.msys.molfile.findframe`
	`schrodinger.application.desmond.packages.msys.pfx`
	`schrodinger.application.desmond.packages.staf`
	`schrodinger.application.desmond.packages.topo`
	`schrodinger.application.desmond.packages.traj`
	`schrodinger.application.desmond.remd`
	`schrodinger.application.desmond.struc`
	`schrodinger.application.desmond.system_builder_util`
	`schrodinger.application.desmond.torsion_related`
	`schrodinger.application.desmond.util`
	`schrodinger.application.epik`
	`schrodinger.application.fpsim`
	`schrodinger.application.fragment_virtual_screening`
	`schrodinger.application.fragment_virtual_screening.bq_query_task`
	`schrodinger.application.fragment_virtual_screening.frag_vs_utils`
	`schrodinger.application.glide`
	`schrodinger.application.glide.client_module`
	`schrodinger.application.glide.ensemble_selection`
	`schrodinger.application.glide.glide`
	`schrodinger.application.glide.glideanalysis`
	`schrodinger.application.glide.gui`
	`schrodinger.application.glide.http_client`
	`schrodinger.application.glide.http_server`
	`schrodinger.application.glide.ligand_designer`
	`schrodinger.application.glide.packages`
	`schrodinger.application.glide.phase_subset`
	`schrodinger.application.glide.poseviewconvert`
	`schrodinger.application.glide.property_names`
	`schrodinger.application.glide.sort_parser_common`
	`schrodinger.application.glide.sort_utils`
	`schrodinger.application.glide.utils`
	`schrodinger.application.glide.xpdes`
	`schrodinger.application.hitexpander`
	`schrodinger.application.inputconfig`
	`schrodinger.application.jaguar`
	`schrodinger.application.jaguar.autots_bonding`
	`schrodinger.application.jaguar.autots_constants`
	`schrodinger.application.jaguar.autots_exceptions`
	`schrodinger.application.jaguar.autots_input`
	`schrodinger.application.jaguar.autots_input_constants`
	`schrodinger.application.jaguar.autots_keywords`
	`schrodinger.application.jaguar.autots_rmsd`
	`schrodinger.application.jaguar.autots_validation`
	`schrodinger.application.jaguar.basis`
	`schrodinger.application.jaguar.check_headers`
	`schrodinger.application.jaguar.constants`
	`schrodinger.application.jaguar.csrch_input_constants`
	`schrodinger.application.jaguar.discretized_1d_function`
	`schrodinger.application.jaguar.distributed_frequencies`
	`schrodinger.application.jaguar.distributed_frequencies.input`
	`schrodinger.application.jaguar.distributed_frequencies.keywords`
	`schrodinger.application.jaguar.distributed_frequencies.validation`
	`schrodinger.application.jaguar.esol_constants`
	`schrodinger.application.jaguar.esol_input`
	`schrodinger.application.jaguar.esol_keywords`
	`schrodinger.application.jaguar.esol_validation`
	`schrodinger.application.jaguar.exceptions`
	`schrodinger.application.jaguar.file_logger`
	`schrodinger.application.jaguar.global_macros`
	`schrodinger.application.jaguar.gui`
	`schrodinger.application.jaguar.gui.base_panel`
	`schrodinger.application.jaguar.gui.basis_selector`
	`schrodinger.application.jaguar.gui.edit_dialog`
	`schrodinger.application.jaguar.gui.filedialog`
	`schrodinger.application.jaguar.gui.input_tab_widgets`
	`schrodinger.application.jaguar.gui.input_tab_widgets_hb`
	`schrodinger.application.jaguar.gui.input_tab_widgets_pka`
	`schrodinger.application.jaguar.gui.solvent_selector`
	`schrodinger.application.jaguar.gui.tabs`
	`schrodinger.application.jaguar.gui.tabs.base_tab`
	`schrodinger.application.jaguar.gui.tabs.coordinates`
	`schrodinger.application.jaguar.gui.tabs.input_sub_tabs`
	`schrodinger.application.jaguar.gui.tabs.input_sub_tabs.base_sub_tab`
	`schrodinger.application.jaguar.gui.tabs.input_sub_tabs.basis_set`
	`schrodinger.application.jaguar.gui.tabs.input_sub_tabs.charge_constraints`
	`schrodinger.application.jaguar.gui.tabs.input_tab`
	`schrodinger.application.jaguar.gui.tabs.irc_tab`
	`schrodinger.application.jaguar.gui.tabs.molecule_tab`
	`schrodinger.application.jaguar.gui.tabs.multi_structure_tab`
	`schrodinger.application.jaguar.gui.tabs.optimization_tab`
	`schrodinger.application.jaguar.gui.tabs.output_tab`
	`schrodinger.application.jaguar.gui.tabs.per_atom_basis_pop_up`
	`schrodinger.application.jaguar.gui.tabs.per_atom_basis_pop_up.per_atom_basis_ui`
	`schrodinger.application.jaguar.gui.tabs.properties_tab`
	`schrodinger.application.jaguar.gui.tabs.reaction_molecules_tab`
	`schrodinger.application.jaguar.gui.tabs.reaction_properties_tab`
	`schrodinger.application.jaguar.gui.tabs.reaction_tab`
	`schrodinger.application.jaguar.gui.tabs.scan_tab`
	`schrodinger.application.jaguar.gui.tabs.scf_tab`
	`schrodinger.application.jaguar.gui.tabs.solvation_tab`
	`schrodinger.application.jaguar.gui.tabs.sub_tab_widgets`
	`schrodinger.application.jaguar.gui.tabs.sub_tab_widgets.base_widgets`
	`schrodinger.application.jaguar.gui.tabs.sub_tab_widgets.basis_set_widgets`
	`schrodinger.application.jaguar.gui.tabs.sub_tab_widgets.charge_constraints_widgets`
	`schrodinger.application.jaguar.gui.tabs.sub_tab_widgets.charge_selector`
	`schrodinger.application.jaguar.gui.tabs.theory_tab`
	`schrodinger.application.jaguar.gui.tabs.transition_state_tab`
	`schrodinger.application.jaguar.gui.theory_selector`
	`schrodinger.application.jaguar.gui.theory_tab_widgets`
	`schrodinger.application.jaguar.gui.timing`
	`schrodinger.application.jaguar.gui.ui`
	`schrodinger.application.jaguar.gui.ui.config_dialog_jaguar_ui`
	`schrodinger.application.jaguar.gui.ui.coordinate_dialog_ui`
	`schrodinger.application.jaguar.gui.ui.define_smarts_panel_ui`
	`schrodinger.application.jaguar.gui.ui.edit_dialog_ui`
	`schrodinger.application.jaguar.gui.ui.excited_state_widget_ui`
	`schrodinger.application.jaguar.gui.ui.input_hb_bottom_ui`
	`schrodinger.application.jaguar.gui.ui.input_hb_top_ui`
	`schrodinger.application.jaguar.gui.ui.input_pka_bottom_ui`
	`schrodinger.application.jaguar.gui.ui.input_pka_top_ui`
	`schrodinger.application.jaguar.gui.ui.input_std_bottom_ui`
	`schrodinger.application.jaguar.gui.ui.input_sub_tabs`
	`schrodinger.application.jaguar.gui.ui.input_sub_tabs.basis_set_ui`
	`schrodinger.application.jaguar.gui.ui.input_sub_tabs.charge_constraints_ui`
	`schrodinger.application.jaguar.gui.ui.input_top_ui`
	`schrodinger.application.jaguar.gui.ui.irc_bottom_ui`
	`schrodinger.application.jaguar.gui.ui.irc_top_ui`
	`schrodinger.application.jaguar.gui.ui.molecule_pka_bottom_ui`
	`schrodinger.application.jaguar.gui.ui.molecule_std_bottom_ui`
	`schrodinger.application.jaguar.gui.ui.molecule_top_ui`
	`schrodinger.application.jaguar.gui.ui.multi_structures_ui`
	`schrodinger.application.jaguar.gui.ui.optimization_tab_ui`
	`schrodinger.application.jaguar.gui.ui.output_tab_ui`
	`schrodinger.application.jaguar.gui.ui.pka_smarts_page_ui`
	`schrodinger.application.jaguar.gui.ui.properties_tab_ui`
	`schrodinger.application.jaguar.gui.ui.reaction_molecules_tab_ui`
	`schrodinger.application.jaguar.gui.ui.reaction_properties_tab_ui`
	`schrodinger.application.jaguar.gui.ui.reaction_tab_ui`
	`schrodinger.application.jaguar.gui.ui.scan_tab_nextgeom_ui`
	`schrodinger.application.jaguar.gui.ui.scan_tab_ui`
	`schrodinger.application.jaguar.gui.ui.scf_tab_ui`
	`schrodinger.application.jaguar.gui.ui.solvent_pka_tab_ui`
	`schrodinger.application.jaguar.gui.ui.solvent_tab_ui`
	`schrodinger.application.jaguar.gui.ui.spin_treatment_widget_ui`
	`schrodinger.application.jaguar.gui.ui.theory_tab_ui`
	`schrodinger.application.jaguar.gui.ui.transition_state_bottom_ui`
	`schrodinger.application.jaguar.gui.ui.transition_state_top_ui`
	`schrodinger.application.jaguar.gui.utils`
	`schrodinger.application.jaguar.hess_guess`
	`schrodinger.application.jaguar.hydrokinetic_constants`
	`schrodinger.application.jaguar.hydrokinetic_input`
	`schrodinger.application.jaguar.hydrokinetic_input_constants`
	`schrodinger.application.jaguar.hydrokinetic_keywords`
	`schrodinger.application.jaguar.hydrokinetic_validation`
	`schrodinger.application.jaguar.input`
	`schrodinger.application.jaguar.jagconvert`
	`schrodinger.application.jaguar.jaguar_config_dialog`
	`schrodinger.application.jaguar.jaguar_diff`
	`schrodinger.application.jaguar.jaguar_keyword_utils`
	`schrodinger.application.jaguar.jaguar_tasks`
	`schrodinger.application.jaguar.keywordDB`
	`schrodinger.application.jaguar.kinetics`
	`schrodinger.application.jaguar.macro_pka_constants`
	`schrodinger.application.jaguar.macro_pka_input`
	`schrodinger.application.jaguar.macro_pka_keywords`
	`schrodinger.application.jaguar.macro_pka_utils`
	`schrodinger.application.jaguar.macro_pka_validation`
	`schrodinger.application.jaguar.mmjag`
	`schrodinger.application.jaguar.neural_network_optimizer`
	`schrodinger.application.jaguar.nmr_basis`
	`schrodinger.application.jaguar.nmr_interactions`
	`schrodinger.application.jaguar.nmr_utils`
	`schrodinger.application.jaguar.output`
	`schrodinger.application.jaguar.permutation_symmetry`
	`schrodinger.application.jaguar.pk50_report`
	`schrodinger.application.jaguar.qrnn`
	`schrodinger.application.jaguar.qrnn.constants`
	`schrodinger.application.jaguar.qrnn.input`
	`schrodinger.application.jaguar.qrnn.keywords`
	`schrodinger.application.jaguar.qrnn.temp_opt`
	`schrodinger.application.jaguar.qrnn.validation`
	`schrodinger.application.jaguar.results`
	`schrodinger.application.jaguar.rotation_barriers_input`
	`schrodinger.application.jaguar.rotation_barriers_keywords`
	`schrodinger.application.jaguar.rotation_barriers_validation`
	`schrodinger.application.jaguar.scan`
	`schrodinger.application.jaguar.simple_spec`
	`schrodinger.application.jaguar.solvation_input`
	`schrodinger.application.jaguar.solvation_keywords`
	`schrodinger.application.jaguar.solvation_validation`
	`schrodinger.application.jaguar.spectroscopy_defaults`
	`schrodinger.application.jaguar.spin_simulator_v2`
	`schrodinger.application.jaguar.textparser`
	`schrodinger.application.jaguar.update_pka_settings`
	`schrodinger.application.jaguar.update_pka_settings_ui`
	`schrodinger.application.jaguar.user_config`
	`schrodinger.application.jaguar.utils`
	`schrodinger.application.jaguar.validation`
	`schrodinger.application.jaguar.workflow_input`
	`schrodinger.application.jaguar.workflow_keywords`
	`schrodinger.application.jaguar.workflow_validation`
	`schrodinger.application.job_monitor`
	`schrodinger.application.job_monitor.buttons`
	`schrodinger.application.job_monitor.diagnostics_dialog_ui`
	`schrodinger.application.job_monitor.file_browser_ui`
	`schrodinger.application.job_monitor.job_info_view_ui`
	`schrodinger.application.job_monitor.job_monitor_diagnostics_dialog`
	`schrodinger.application.job_monitor.job_monitor_file_browser`
	`schrodinger.application.job_monitor.job_monitor_gui`
	`schrodinger.application.job_monitor.job_monitor_icons_rc`
	`schrodinger.application.job_monitor.job_monitor_models`
	`schrodinger.application.job_monitor.job_monitor_progress_bar`
	`schrodinger.application.job_monitor.job_monitor_stylesheets`
	`schrodinger.application.job_monitor.job_monitor_table`
	`schrodinger.application.job_monitor.job_monitor_widgets`
	`schrodinger.application.job_monitor.top_level_view_ui`
	`schrodinger.application.job_monitor.util`
	`schrodinger.application.jobserver_cert_gui_dir`
	`schrodinger.application.jobserver_cert_gui_dir.jobserver_cert_gui_icons_rc`
	`schrodinger.application.jobserver_cert_gui_dir.registration_dialogs`
	`schrodinger.application.jobserver_cert_gui_dir.registration_panel_ui`
	`schrodinger.application.licensing`
	`schrodinger.application.licensing.flexlm`
	`schrodinger.application.licensing.licadmin`
	`schrodinger.application.licensing.licerror`
	`schrodinger.application.licensing.licserver`
	`schrodinger.application.licensing.licserver.client`
	`schrodinger.application.licensing.licserver.exceptions`
	`schrodinger.application.licensing.licserver.install`
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	`schrodinger.infra.unusable_module_importer`
	`schrodinger.infra.util`
	`schrodinger.job`
	`schrodinger.job.cert`
	`schrodinger.job.download`
	`schrodinger.job.driver_decorator`
	`schrodinger.job.files`
	`schrodinger.job.host_check`
	`schrodinger.job.hunt_stub`
	`schrodinger.job.jobcontrol`
	`schrodinger.job.jobhandler`
	`schrodinger.job.jobwriter`
	`schrodinger.job.launchapi`
	`schrodinger.job.launcher`
	`schrodinger.job.launchparams`
	`schrodinger.job.queue`
	`schrodinger.job.remote_command`
	`schrodinger.job.resource`
	`schrodinger.job.server`
	`schrodinger.job.util`
	`schrodinger.livedesign`
	`schrodinger.livedesign.bbchem_endpoints`
	`schrodinger.livedesign.biologics`
	`schrodinger.livedesign.biologics.fasta`
	`schrodinger.livedesign.biologics.modeling`
	`schrodinger.livedesign.biologics.registration`
	`schrodinger.livedesign.biologics.sequence`
	`schrodinger.livedesign.check_reaction`
	`schrodinger.livedesign.cmdline`
	`schrodinger.livedesign.convert`
	`schrodinger.livedesign.draw`
	`schrodinger.livedesign.entity_type`
	`schrodinger.livedesign.model_io`
	`schrodinger.livedesign.preprocessor`
	`schrodinger.livedesign.pymol_image`
	`schrodinger.livedesign.registration`
	`schrodinger.livedesign.rgfile_parse`
	`schrodinger.livedesign.rgroup_decomposition`
	`schrodinger.livedesign.run_reaction`
	`schrodinger.livedesign.search`
	`schrodinger.livedesign.setup_reaction`
	`schrodinger.maestro`
	`schrodinger.maestro.commands`
	`schrodinger.maestro.maestro`
	`schrodinger.maestro.maestro_job_callbacks`
	`schrodinger.maestro.markers`
	`schrodinger.maestro.workspace_panels`
	`schrodinger.maestro_utils`
	`schrodinger.maestro_utils.find_tool_bar`
	`schrodinger.maestro_utils.find_tool_bar.constants`
	`schrodinger.maestro_utils.find_tool_bar.find_tool_bar_ui`
	`schrodinger.maestro_utils.find_tool_bar.find_tool_bar_widget`
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	`schrodinger.maestro_utils.nonstandard_residue_utils`
	`schrodinger.math`
	`schrodinger.math.mathutils`
	`schrodinger.math.multi_parameter_optimization`
	`schrodinger.math.sampling`
	`schrodinger.models`
	`schrodinger.models.adapters`
	`schrodinger.models.adapters.abstractadapter`
	`schrodinger.models.adapters.inputconfig`
	`schrodinger.models.advanced_mappers`
	`schrodinger.models.diffy`
	`schrodinger.models.json`
	`schrodinger.models.jsonable`
	`schrodinger.models.mappers`
	`schrodinger.models.param_class_convertors`
	`schrodinger.models.paramable`
	`schrodinger.models.parameters`
	`schrodinger.models.paramtools`
	`schrodinger.models.presets`
	`schrodinger.models.yaml_utils`
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	`schrodinger.pipeline.compiled_functions`
	`schrodinger.pipeline.input`
	`schrodinger.pipeline.pipeio`
	`schrodinger.pipeline.pipeline`
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	`schrodinger.protein.align`
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	`schrodinger.protein.analysis`
	`schrodinger.protein.analysis_params`
	`schrodinger.protein.annotation`
	`schrodinger.protein.assignment`
	`schrodinger.protein.biounit`
	`schrodinger.protein.buildpeptide`
	`schrodinger.protein.captermini`
	`schrodinger.protein.constants`
	`schrodinger.protein.findhets`
	`schrodinger.protein.getpdb`
	`schrodinger.protein.getpdb_utility`
	`schrodinger.protein.gpcr`
	`schrodinger.protein.gpcr.annotate`
	`schrodinger.protein.gpcr.gpcrdb`
	`schrodinger.protein.gpcr.sql`
	`schrodinger.protein.gpcr.tasks`
	`schrodinger.protein.gpcr.update_gpcr_db`
	`schrodinger.protein.helix`
	`schrodinger.protein.helm`
	`schrodinger.protein.helm.helm_renderer`
	`schrodinger.protein.helm.image_generation`
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	`schrodinger.protein.natural_analog`
	`schrodinger.protein.nonstandard_residues`
	`schrodinger.protein.pdbname`
	`schrodinger.protein.predictors`
	`schrodinger.protein.process_enamine_db`
	`schrodinger.protein.properties`
	`schrodinger.protein.protassign`
	`schrodinger.protein.protassign.changeables`
	`schrodinger.protein.protassign.constants`
	`schrodinger.protein.protassign.hbond_cluster`
	`schrodinger.protein.protassign.network_solver`
	`schrodinger.protein.protassign.pka_prediction`
	`schrodinger.protein.protassign.unsatisfied_donors`
	`schrodinger.protein.protassign.utils`
	`schrodinger.protein.reliability`
	`schrodinger.protein.remediate`
	`schrodinger.protein.renumber_residues`
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	`schrodinger.protein.rotamers`
	`schrodinger.protein.seqres`
	`schrodinger.protein.sequence`
	`schrodinger.protein.tasks`
	`schrodinger.protein.tasks.binding_site_align`
	`schrodinger.protein.tasks.blast`
	`schrodinger.protein.tasks.clustal`
	`schrodinger.protein.tasks.descriptors`
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	`schrodinger.protein.tasks.kinase`
	`schrodinger.protein.tasks.mock_blast_output`
	`schrodinger.protein.tasks.muscle`
	`schrodinger.protein.tasks.optimize_alignment`
	`schrodinger.protein.tasks.pfam`
	`schrodinger.protein.tasks.sta`
	`schrodinger.protein.tasks.structure_alignment`
	`schrodinger.rdkit`
	`schrodinger.rdkit.alignment`
	`schrodinger.rdkit.coarsegrain`
	`schrodinger.rdkit.filtering`
	`schrodinger.rdkit.mesomerizer`
	`schrodinger.rdkit.molio`
	`schrodinger.rdkit.rdkit_adapter`
	`schrodinger.rdkit.rgroup`
	`schrodinger.rdkit.sorted_molwriter`
	`schrodinger.rdkit.substructure`
	`schrodinger.rdkit_extensions`
	`schrodinger.seam`
	`schrodinger.seam.coders`
	`schrodinger.seam.debug`
	`schrodinger.seam.examples`
	`schrodinger.seam.examples.active_learning_weigher`
	`schrodinger.seam.examples.haystack`
	`schrodinger.seam.examples.rescount`
	`schrodinger.seam.io`
	`schrodinger.seam.io.chemio`
	`schrodinger.seam.io.textio`
	`schrodinger.seam.metric`
	`schrodinger.seam.options`
	`schrodinger.seam.options.pipeline_options`
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	`schrodinger.seam.runners.urns`
	`schrodinger.seam.testing`
	`schrodinger.seam.testing.benchmarks`
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	`schrodinger.seam.testing.stateful`
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	`schrodinger.seam.viz.watcher`
	`schrodinger.seam.viz.watcherd`
	`schrodinger.shape`
	`schrodinger.sitemap`
	`schrodinger.stepper`
	`schrodinger.stepper.app`
	`schrodinger.stepper.cloud`
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	`schrodinger.structure.atom_numbering_monitor`
	`schrodinger.structure.structure`
	`schrodinger.structure.workflow_action_menu`
	`schrodinger.structutils`
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	`schrodinger.structutils.assignbondorders`
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	`schrodinger.structutils.ccd`
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	`schrodinger.structutils.interactions.protein_protein_interactions`
	`schrodinger.structutils.interactions.salt_bridge`
	`schrodinger.structutils.interactions.ssbond`
	`schrodinger.structutils.interactions.steric_clash`
	`schrodinger.structutils.io`
	`schrodinger.structutils.measure`
	`schrodinger.structutils.minimize`
	`schrodinger.structutils.pbc_tools`
	`schrodinger.structutils.residue`
	`schrodinger.structutils.rgroup_enumerate`
	`schrodinger.structutils.rings`
	`schrodinger.structutils.ringspear`
	`schrodinger.structutils.rmsd`
	`schrodinger.structutils.shuffle`
	`schrodinger.structutils.sitealign`
	`schrodinger.structutils.smiles`
	`schrodinger.structutils.smilesfilter`
	`schrodinger.structutils.sort`
	`schrodinger.structutils.standard_nuclear_orientation`
	`schrodinger.structutils.structalign`
	`schrodinger.structutils.structalign2`
	`schrodinger.structutils.transform`
	`schrodinger.surface`
	`schrodinger.tasks`
	`schrodinger.tasks.cmdline`
	`schrodinger.tasks.drivers`
	`schrodinger.tasks.gui`
	`schrodinger.tasks.hosts`
	`schrodinger.tasks.jobtasks`
	`schrodinger.tasks.queue`
	`schrodinger.tasks.remote_modules`
	`schrodinger.tasks.taskmanager`
	`schrodinger.tasks.tasks`
	`schrodinger.tasks.taskszmq`
	`schrodinger.thirdparty`
	`schrodinger.thirdparty.networkx_algos`
	`schrodinger.trajectory`
	`schrodinger.trajectory.pbc_manager`
	`schrodinger.trajectory.prody`
	`schrodinger.trajectory.prody.crosscorrelation`
	`schrodinger.trajectory.prody.ensemble`
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	`schrodinger.trajectory.prody.pca`
	`schrodinger.trajectory.prody.test_arrow`
	`schrodinger.trajectory.prody.writenmd`
	`schrodinger.trajectory.traj_dialog_ui`
	`schrodinger.trajectory.trajectory_gui_dir`
	`schrodinger.trajectory.trajectory_gui_dir.advanced_plot_ui`
	`schrodinger.trajectory.trajectory_gui_dir.advanced_settings`
	`schrodinger.trajectory.trajectory_gui_dir.advanced_settings_ui`
	`schrodinger.trajectory.trajectory_gui_dir.banners`
	`schrodinger.trajectory.trajectory_gui_dir.centroid_banner_ui`
	`schrodinger.trajectory.trajectory_gui_dir.collapsible_plot_ui`
	`schrodinger.trajectory.trajectory_gui_dir.conf_wheel_plot_panel_ui`
	`schrodinger.trajectory.trajectory_gui_dir.custom_analyzers`
	`schrodinger.trajectory.trajectory_gui_dir.custom_asl_sets_dialog_ui`
	`schrodinger.trajectory.trajectory_gui_dir.custom_substructure_sets_dialog_ui`
	`schrodinger.trajectory.trajectory_gui_dir.display_settings_data`
	`schrodinger.trajectory.trajectory_gui_dir.display_settings_manager`
	`schrodinger.trajectory.trajectory_gui_dir.energy_plot_ui`
	`schrodinger.trajectory.trajectory_gui_dir.export_movie`
	`schrodinger.trajectory.trajectory_gui_dir.export_movie_ui`
	`schrodinger.trajectory.trajectory_gui_dir.export_snapshot_structures`
	`schrodinger.trajectory.trajectory_gui_dir.export_snapshot_structures_ui`
	`schrodinger.trajectory.trajectory_gui_dir.export_structure_enums`
	`schrodinger.trajectory.trajectory_gui_dir.export_structures`
	`schrodinger.trajectory.trajectory_gui_dir.export_structures_ui`
	`schrodinger.trajectory.trajectory_gui_dir.frame_structure_exporter`
	`schrodinger.trajectory.trajectory_gui_dir.icons_rc`
	`schrodinger.trajectory.trajectory_gui_dir.job_settings_dialog_ui`
	`schrodinger.trajectory.trajectory_gui_dir.planar_banner_ui`
	`schrodinger.trajectory.trajectory_gui_dir.playback_settings`
	`schrodinger.trajectory.trajectory_gui_dir.playback_settings_data`
	`schrodinger.trajectory.trajectory_gui_dir.playback_settings_ui`
	`schrodinger.trajectory.trajectory_gui_dir.rama_plot_panel_ui`
	`schrodinger.trajectory.trajectory_gui_dir.rdf_plot_ui`
	`schrodinger.trajectory.trajectory_gui_dir.rmsd_settings_dialog_ui`
	`schrodinger.trajectory.trajectory_gui_dir.secondary_structure_data`
	`schrodinger.trajectory.trajectory_gui_dir.shortcut_ui`
	`schrodinger.trajectory.trajectory_gui_dir.snapshot_custom_display_settings`
	`schrodinger.trajectory.trajectory_gui_dir.snapshot_custom_display_settings_ui`
	`schrodinger.trajectory.trajectory_gui_dir.snapshot_panel`
	`schrodinger.trajectory.trajectory_gui_dir.snapshot_panel_ui`
	`schrodinger.trajectory.trajectory_gui_dir.stylesheet`
	`schrodinger.trajectory.trajectory_gui_dir.traj_plot_ui`
	`schrodinger.trajectory.trajectory_gui_dir.traj_plot_widgets`
	`schrodinger.trajectory.trajectory_gui_dir.trajectory_messages`
	`schrodinger.trajectory.trajectoryviewer`
	`schrodinger.trajectory.utils`
	`schrodinger.trajectory.validate_trajectory`
	`schrodinger.ui`
	`schrodinger.ui.chooseligand`
	`schrodinger.ui.dendrogram`
	`schrodinger.ui.images_rc`
	`schrodinger.ui.ipython_structure`
	`schrodinger.ui.ligfilter`
	`schrodinger.ui.ligfilter_definition_dialog_ui`
	`schrodinger.ui.ligfilter_ui`
	`schrodinger.ui.maestro_ui`
	`schrodinger.ui.picking`
	`schrodinger.ui.picking_dir`
	`schrodinger.ui.picking_dir.pick_constraint_res_no_maestro_dialog_ui`
	`schrodinger.ui.picking_dir.pick_lig_no_maestro_dialog_ui`
	`schrodinger.ui.picking_dir.pick_res_no_maestro_dialog_ui`
	`schrodinger.ui.qt`
	`schrodinger.ui.qt.appframework`
	`schrodinger.ui.qt.appframework2`
	`schrodinger.ui.qt.appframework2.af2`
	`schrodinger.ui.qt.appframework2.af2_template`
	`schrodinger.ui.qt.appframework2.application`
	`schrodinger.ui.qt.appframework2.appmethods`
	`schrodinger.ui.qt.appframework2.baseapp`
	`schrodinger.ui.qt.appframework2.debug`
	`schrodinger.ui.qt.appframework2.debug_gui`
	`schrodinger.ui.qt.appframework2.debug_gui_ui`
	`schrodinger.ui.qt.appframework2.debugcore`
	`schrodinger.ui.qt.appframework2.debugwidgets`
	`schrodinger.ui.qt.appframework2.jobnames`
	`schrodinger.ui.qt.appframework2.jobs`
	`schrodinger.ui.qt.appframework2.knime_af2`
	`schrodinger.ui.qt.appframework2.maestro_callback`
	`schrodinger.ui.qt.appframework2.markers`
	`schrodinger.ui.qt.appframework2.settings`
	`schrodinger.ui.qt.appframework2.validation`
	`schrodinger.ui.qt.appframework2.validators`
	`schrodinger.ui.qt.appframework2.wizards`
	`schrodinger.ui.qt.atom_weights_table_ui`
	`schrodinger.ui.qt.atom_weights_table_widget`
	`schrodinger.ui.qt.atomselector`
	`schrodinger.ui.qt.basewidgets`
	`schrodinger.ui.qt.borderless_popup_ui`
	`schrodinger.ui.qt.color_picker`
	`schrodinger.ui.qt.config_dialog`
	`schrodinger.ui.qt.config_dialog_open_mp_ui`
	`schrodinger.ui.qt.config_dialog_queue_ui`
	`schrodinger.ui.qt.datamapper`
	`schrodinger.ui.qt.decorators`
	`schrodinger.ui.qt.delegates`
	`schrodinger.ui.qt.dendrogram`
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	`schrodinger.ui.qt.dialbox_dir`
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	`schrodinger.ui.qt.directory_selector`
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	`schrodinger.ui.qt.filter_dialog_ui`
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	`schrodinger.ui.qt.forcefield.ffprojectsettingsdlg`
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	`schrodinger.ui.qt.forcefield.ffselector`
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	`schrodinger.ui.qt.pdb_dialog`
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	`schrodinger.ui.qt.periodictable`
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	`schrodinger.ui.qt.presets.save_presets_dialog_ui`
	`schrodinger.ui.qt.propertyselector`
	`schrodinger.ui.qt.protein_health_viewer`
	`schrodinger.ui.qt.protein_health_viewer_ui`
	`schrodinger.ui.qt.radial_plot`
	`schrodinger.ui.qt.rama`
	`schrodinger.ui.qt.rdmol_views`
	`schrodinger.ui.qt.recent_completer`
	`schrodinger.ui.qt.rename_favorite_dialog`
	`schrodinger.ui.qt.rename_favorite_dialog_ui`
	`schrodinger.ui.qt.schart`
	`schrodinger.ui.qt.schrodinger_ipython`
	`schrodinger.ui.qt.schrodingerstyle`
	`schrodinger.ui.qt.select_residues_dialog`
	`schrodinger.ui.qt.select_residues_dialog_ui`
	`schrodinger.ui.qt.smatplotlib`
	`schrodinger.ui.qt.standard`
	`schrodinger.ui.qt.standard.colors`
	`schrodinger.ui.qt.standard.constants`
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	`schrodinger.ui.qt.standard.panelx_stylesheet`
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	`schrodinger.ui.qt.standard_widgets.hyperlink`
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	`schrodinger.ui.qt.standard_widgets.sketcher_text_widget`
	`schrodinger.ui.qt.standard_widgets.sketcher_text_widget_ui`
	`schrodinger.ui.qt.standard_widgets.standard_widgets_rc`
	`schrodinger.ui.qt.standard_widgets.statusbar`
	`schrodinger.ui.qt.structtable`
	`schrodinger.ui.qt.structure2d`
	`schrodinger.ui.qt.structure_selector`
	`schrodinger.ui.qt.style`
	`schrodinger.ui.qt.stylesheet`
	`schrodinger.ui.qt.swidgets`
	`schrodinger.ui.qt.table`
	`schrodinger.ui.qt.table_helper`
	`schrodinger.ui.qt.table_speed_up`
	`schrodinger.ui.qt.tablewidget`
	`schrodinger.ui.qt.tasks`
	`schrodinger.ui.qt.tasks.config_dialog_ui`
	`schrodinger.ui.qt.tasks.config_info_ui`
	`schrodinger.ui.qt.tasks.configwidgets`
	`schrodinger.ui.qt.tasks.taskbar2`
	`schrodinger.ui.qt.tasks.taskbar_ui`
	`schrodinger.ui.qt.tasks.taskbarwidgets`
	`schrodinger.ui.qt.tasks.taskwidgets`
	`schrodinger.ui.qt.tooltips`
	`schrodinger.ui.qt.utils`
	`schrodinger.ui.qt.widgetmixins`
	`schrodinger.ui.qt.widgetmixins.basicmixins`
	`schrodinger.ui.qt.widgetmixins.mock_ui`
	`schrodinger.ui.qt.widgetmixins.panelmixins`
	`schrodinger.ui.qt.xsignals`
	`schrodinger.ui.residueselector`
	`schrodinger.ui.sketcher`
	`schrodinger.ui.sketcher_extensions`
	`schrodinger.ui.sketcher_image`
	`schrodinger.ui.sketcher_smarts_dialog`
	`schrodinger.ui.sketcher_smarts_dialog_ui`
	`schrodinger.ui.two_d_viewer`
	`schrodinger.ui.two_d_viewer_ui`
	`schrodinger.utils`
	`schrodinger.utils.cgxutils`
	`schrodinger.utils.cmdline`
	`schrodinger.utils.colorscheme`
	`schrodinger.utils.compare`
	`schrodinger.utils.csv_unicode`
	`schrodinger.utils.deprecation`
	`schrodinger.utils.documentation`
	`schrodinger.utils.env`
	`schrodinger.utils.featureflags`
	`schrodinger.utils.featureflags.featureflags`
	`schrodinger.utils.featureflags.write`
	`schrodinger.utils.fileutils`
	`schrodinger.utils.funcchains`
	`schrodinger.utils.funcgroups`
	`schrodinger.utils.imputils`
	`schrodinger.utils.install_scripts`
	`schrodinger.utils.installation_check`
	`schrodinger.utils.license`
	`schrodinger.utils.ligfilter`
	`schrodinger.utils.log`
	`schrodinger.utils.machid`
	`schrodinger.utils.maestro_scripts_path`
	`schrodinger.utils.mmutil`
	`schrodinger.utils.moduleproxy`
	`schrodinger.utils.multifpfile`
	`schrodinger.utils.net`
	`schrodinger.utils.openmpi`
	`schrodinger.utils.platform`
	`schrodinger.utils.postinstall`
	`schrodinger.utils.preferences`
	`schrodinger.utils.profiling`
	`schrodinger.utils.pymol`
	`schrodinger.utils.qapplication`
	`schrodinger.utils.qt_utils`
	`schrodinger.utils.scollections`
	`schrodinger.utils.sea`
	`schrodinger.utils.sea.common`
	`schrodinger.utils.sea.evalor`
	`schrodinger.utils.sea.sea`
	`schrodinger.utils.singledashoptionparser`
	`schrodinger.utils.sshconfig`
	`schrodinger.utils.subproc`
	`schrodinger.utils.subprocess`
	`schrodinger.utils.sysinfo`
	`schrodinger.utils.thread_utils`
	`schrodinger.utils.typing`
	`schrodinger.utils.units`
	`schrodinger.utils.withnone`