schrodinger.protein.tasks.pfam module¶
- class schrodinger.protein.tasks.pfam.PfamTask(*args, _param_type=<object object>, **kwargs)¶
Bases:
schrodinger.tasks.jobtasks.CmdJobTask- DEFAULT_TASKDIR_SETTING = 2¶
- backend_name = 'pfam'¶
- class Input(*args, _param_type=<object object>, **kwargs)¶
Bases:
schrodinger.models.parameters.CompoundParam- seq: schrodinger.protein.sequence.ProteinSequence¶
A parameter of the class.
- seqChanged¶
A
pyqtSignalemitted by instances of the class.
- seqReplaced¶
A
pyqtSignalemitted by instances of the class.
- class Output(*args, _param_type=<object object>, **kwargs)¶
Bases:
schrodinger.tasks.jobtasks._CmdJobTaskOutput- pfam: str¶
A parameter of the class.
- name: str¶
A parameter of the class.
- incorporation_fileChanged¶
A
pyqtSignalemitted by instances of the class.
- incorporation_fileReplaced¶
A
pyqtSignalemitted by instances of the class.
- log_fileChanged¶
A
pyqtSignalemitted by instances of the class.
- log_fileReplaced¶
A
pyqtSignalemitted by instances of the class.
- nameChanged¶
A
pyqtSignalemitted by instances of the class.
- nameReplaced¶
A
pyqtSignalemitted by instances of the class.
- output_filesChanged¶
A
pyqtSignalemitted by instances of the class.
- output_filesReplaced¶
A
pyqtSignalemitted by instances of the class.
- pfamChanged¶
A
pyqtSignalemitted by instances of the class.
- pfamReplaced¶
A
pyqtSignalemitted by instances of the class.
- makeCmd()¶
@overrides: tasks.AbstractCmdTask
- calling_contextChanged¶
A
pyqtSignalemitted by instances of the class.
- calling_contextReplaced¶
A
pyqtSignalemitted by instances of the class.
- failure_infoChanged¶
A
pyqtSignalemitted by instances of the class.
- failure_infoReplaced¶
A
pyqtSignalemitted by instances of the class.
- input: parameters.CompoundParam¶
A parameter of the class.
- inputChanged¶
A
pyqtSignalemitted by instances of the class.
- inputReplaced¶
A
pyqtSignalemitted by instances of the class.
- job_configChanged¶
A
pyqtSignalemitted by instances of the class.
- job_configReplaced¶
A
pyqtSignalemitted by instances of the class.
- max_progressChanged¶
A
pyqtSignalemitted by instances of the class.
- max_progressReplaced¶
A
pyqtSignalemitted by instances of the class.
- nameChanged¶
A
pyqtSignalemitted by instances of the class.
- nameReplaced¶
A
pyqtSignalemitted by instances of the class.
- output: parameters.CompoundParam¶
A parameter of the class.
- outputChanged¶
A
pyqtSignalemitted by instances of the class.
- outputReplaced¶
A
pyqtSignalemitted by instances of the class.
- progressChanged¶
A
pyqtSignalemitted by instances of the class.
- progressReplaced¶
A
pyqtSignalemitted by instances of the class.
- progress_stringChanged¶
A
pyqtSignalemitted by instances of the class.
- progress_stringReplaced¶
A
pyqtSignalemitted by instances of the class.
- statusChanged¶
A
pyqtSignalemitted by instances of the class.
- statusReplaced¶
A
pyqtSignalemitted by instances of the class.