schrodinger.application.desmond.picklejar module

Facilities for pickling objects that are otherwise uneasy to pickle, e.g., class attributes.

Copyright Schrodinger, LLC. All rights reserved.

class schrodinger.application.desmond.picklejar.CustomUnpickler(file, *, fix_imports=True, encoding='ASCII', errors='strict', buffers=())

Bases: _pickle.Unpickler

find_class(module, name)

Return an object from a specified module.

If necessary, the module will be imported. Subclasses may override this method (e.g. to restrict unpickling of arbitrary classes and functions).

This method is called whenever a class or a function object is needed. Both arguments passed are str objects.

__init__(*args, **kwargs)

load()

Load a pickle.

Read a pickled object representation from the open file object given in the constructor, and return the reconstituted object hierarchy specified therein.

memo

persistent_load

class schrodinger.application.desmond.picklejar.PickleJar

Bases: object

jar = {<class 'schrodinger.application.desmond.picklejar.Picklable'>: {}, <class 'schrodinger.application.desmond.cmj.StageBase'>: {'count': None}, <class 'schrodinger.application.desmond.cmj.StructureStageBase'>: {}, <class 'schrodinger.application.desmond.stage.jobs.FepJob'>: {'id': None}, <class 'schrodinger.application.desmond.stage.analysis.PLAnalysis'>: {}, <class 'schrodinger.application.desmond.stage.analysis.Analysis'>: {}, <class 'schrodinger.application.desmond.stage.analysis.FepanaJob'>: {'id': None}, <class 'schrodinger.application.desmond.stage.analysis.FepAnalysis'>: {}}

static serialize(fh)

static deserialize(fh)

class schrodinger.application.desmond.picklejar.PicklableMetaClass(name, bases, dict)

Bases: type

__init__(name, bases, dict)

mro()

Return a type’s method resolution order.

class schrodinger.application.desmond.picklejar.Picklable

Bases: object

class schrodinger.application.desmond.picklejar.PickleState

Bases: object