schrodinger.application.bioluminate.sliderchart module

Tools for using matplotlib charts.

Copyright Schrodinger, LLC. All rights reserved.

schrodinger.application.bioluminate.sliderchart.prevent_overlapping_x_labels(canvas, axes_number=0)

Given a canvas that contains a figure that contains at least one axes instance, checks the x-axis tick labels to make sure they don’t overlap. If they do, the number of ticks is reduced until there is no overlap.

Parameters

• canvas (matplotlib canvas object) – the canvas that contains the figure/axes objects

• axes_number (int) – the index of the axes on the figure to examine. Default is 0, which is the first set of axis added to the figure.

class schrodinger.application.bioluminate.sliderchart.SliderPlot(xvals=None, yvals=None, size=(400, 400), x_label='Residue Sequence', y_label='Values', x_range=None, y_range=None, color='black', cvals=None, bg='white', title='Results', fontsize='small', chart_type='line', marker='square', marker_size=9, shade_color='0.70', hslider_color='red', vslider_color='blue', slider_thickness=3, slider_pick_tolerance=7, slider_moved_callback=None, use_hsliders=True, xstart=0.2, xextent=None, subplot_pos=None)

Bases: PyQt6.QtWidgets.QFrame

A chart that contains four lines the user can slide to select a region of the chart.

__init__(xvals=None, yvals=None, size=(400, 400), x_label='Residue Sequence', y_label='Values', x_range=None, y_range=None, color='black', cvals=None, bg='white', title='Results', fontsize='small', chart_type='line', marker='square', marker_size=9, shade_color='0.70', hslider_color='red', vslider_color='blue', slider_thickness=3, slider_pick_tolerance=7, slider_moved_callback=None, use_hsliders=True, xstart=0.2, xextent=None, subplot_pos=None)

Create a SliderPlot instance.

The plot is returned in a QFrame widget.

Parameters

• xvals (list) – the x values to plot

• yvals (list) – y series to plot, should be the same length as xvals

• size (tuple) – (x, y) plot size in pixels

• x_label (str) – X-axis label

• y_label (str) – Y-axis label

• x_range (tuple) – (min, max) values for the X-axis, default is to show all values

• y_range (tuple) – (min, max) values for the Y-axis, default is to show all values

• color (str) – color for the line plot - this is overridden by cvals if cvals is given.

• cvals (list, tuple or str) – For scatterplots, either a list or tuple of color values for every point, or a string to set a single color for all points. Do not use an RGB list or tuple to set a single color for all points, as that will be interpreted as intended to set individual colors for 3 (or 4 for RGBA) points. This overrides the value of color, and is not used for line plots, only scatter plots. If not given, the value of color is used.

• bg (str) – color name for the plot background. See marker:color for some color names.

• title (str) – the title of the plot

• chart_type (str) – ‘line’ if the chart is a line plot (default), ‘scatter’ if the chart is scatterplot

• shade_color (str) – A matplotlib-recognized color string that the unselected areas will be shaded

• hslider_color (str) – A matplotlib-recognized color string that the horizontal sliders will be colored

• vslider_color (str) – A matplotlib-recognized color string that the vertical sliders will be colored

• slider_thickness (int) – Linewidth of the slider lines

• slider_pick_tolerance (int) – Number of pixels the mouse click can be off and still grab the slider

• slider_moved_callback (callable) – Called when one of the slider lines has been moved. The callback will receive the SlidableLine object that was moved.

• marker (tuple) – tuple of (symbol, color, size), only used for scatter plots

Marker names are:

• symbol (1-character str)

• s - square (‘square’, rectangle accepted)

• o - circle (‘circle’ accepted)

• ^ - triangle up (‘arrow’ accepted)

• > - triangle right

• < - triangle left

• v - triangle down

• d - diamond (‘diamond’ accepted)

• p - pentagon

• h - hexagon

• 8 - octagon

• • • plus (‘cross’ accepted)

• x - x

Parameters

• marker_size (int) – size of the marker

• fontsize (int or str) – size in points, or one of the following - - xx-small - x-small - small - medium - large - x-large - xx-large

• use_hsliders (bool) – horizontal slider is enabled, if True

• xstart – left percentage margin of the figure

• xextent (float of None) – if float, right percentage margin of the figure

• subplot_pos (int) – A three digit integer, where the first digit is the number of rows, the second the number of columns, and the third the index of the current subplot. Index goes left to right, followed but top to bottom. Hence in a 4 grid, top-left is 1, top-right is 2 bottom left is 3 and bottom right is 4. Subplot overrides x_start, y_start, x_end, and y_end.

Xstart

float

Return type

QFrame

Returns

The QFrame widget that contains the plot

replot()

Replot the chart with the current settings

removeColorsForMissingPoints()

Remove any colors for points that are missing X or Y data (X or Y = None) from the list of original values. Does nothing if the point colors are not a list or tuple.

setCVals(cvals)

Set the color values for scatterplot points and replot

Parameters

cvals (list, tuple or str) – Either a list or tuple of color values for every point, or a string to set a single color for all points. Do not use an RGB list or tuple to set a single color for all points, as that will be interpreted as intended to set individual colors for 3 (or 4 for RGBA) points.

removeMissingPoints()

Remove any points that are missing X or Y data (X or Y = None) from the list of original values

Return type

tuple

Returns

tuple of (x-values, y-values) where each item is a list of values. Any point for which x-value or y-value is None has been removed.

setXY(xvals, yvals, x_range=None, y_range=None, replot=True)

Change the X and Y values of the plot

Parameters

• xvals (list) – the x values to plot

• yvals (list) – y series to plot, should be the same length as xvals

• x_range (tuple) – (min, max) values for the X-axis, default is to show all values

• y_range (tuple) – (min, max) values for the Y-axis, default is to show all values

• replot (bool) – True of plot should be redrawn (default), False if not. False can be used if a subsequent setY is required.

setX(xvals, x_range=None, replot=True, reset_yrange=False)

Change the X values of the plot

Parameters

• xvals (list) – the x values to plot

• x_range (tuple) – (min, max) values for the X-axis, default is to show all values

• replot (bool) – True of plot should be redrawn (default), False if not. False can be used if a subsequent setY is required.

• reset_yrange (bool) – True if the y_range should be reset, False (default) if not. It is useful to reset this if the number of datapoints is changing.

setY(yvals, y_range=None, replot=True, reset_xrange=False)

Change the Y values of the plot

Parameters

• yvals (list) – the y values to plot

• y_range (tuple) – (min, max) values for the Y-axis, default is to show all values

• replot (bool) – True of plot should be redrawn (default), False if not. False can be used if a subsequent setY is required.

• reset_xrange (bool) – True if the y_range should be reset, False (default) if not. It is useful to reset this if the number of datapoints is changing.

getHSliderMin()

Get the current value of the minimum horizontal slider line in plot data units

Return type

float or -INF

Returns

The current value of the minimum horizontal slider, if in use

getHSliderMax()

Get the current value of the maximum horizontal slider line in plot data units

Return type

float or INF

Returns

The current value of the maximum horizontal slider, if in use

getVSliderMin()

Get the current value of the minimum vertical slider line in plot data units

Return type

float

Returns

The current value of the minimum vertical slider

getVSliderMax()

Get the current value of the maximum vertical slider line in plot data units

Return type

float

Returns

The current value of the maximum vertical slider

getSelectedIndexes()

Get the index in the x-value list of points that are contained within the slider lines.

Return type

list

Returns

index in the x-value list of points that are within the box bounded by the slider lines.

getSelectedXY()

Get the set of (x, y) points that are contained within the slider lines

Return type

list

Returns

(x, y) data points that are within the box bounded by the slider lines

getSelectedX()

Get the set of x values for all points that are contained within the slider lines.

Return type

list

Returns

x values of data points that are within the box bounded by the slider lines

setToolbarMessage(event)

Set toolbar message to also work with subplots and show coordinates of subplots in the message

Parameters

event (matplotlib.backend_bases.MouseEvent) – the mouse event prompting this method to be called. Contains information about the location of the cursor and above which matplotlib.axes.Axes object the cursor was at the time of the event, if any.

reset()

Reset the plot

Box = 1

DrawChildren = 2

DrawWindowBackground = 1

HLine = 4

IgnoreMask = 4

NoFrame = 0

class PaintDeviceMetric(value)

Bases: enum.Enum

An enumeration.

PdmWidth = 1

PdmHeight = 2

PdmWidthMM = 3

PdmHeightMM = 4

PdmNumColors = 5

PdmDepth = 6

PdmDpiX = 7

PdmDpiY = 8

PdmPhysicalDpiX = 9

PdmPhysicalDpiY = 10

PdmDevicePixelRatio = 11

PdmDevicePixelRatioScaled = 12

Panel = 2

PdmDepth = 6

PdmDevicePixelRatio = 11

PdmDevicePixelRatioScaled = 12

PdmDpiX = 7

PdmDpiY = 8

PdmHeight = 2

PdmHeightMM = 4

PdmNumColors = 5

PdmPhysicalDpiX = 9

PdmPhysicalDpiY = 10

PdmWidth = 1

PdmWidthMM = 3

Plain = 16

Raised = 32

class RenderFlag(value)

Bases: enum.Flag

An enumeration.

DrawWindowBackground = 1

DrawChildren = 2

IgnoreMask = 4

class Shadow(value)

Bases: enum.IntEnum

An enumeration.

Plain = 16

Raised = 32

Sunken = 48

Shadow_Mask = 240

class Shape(value)

Bases: enum.IntEnum

An enumeration.

NoFrame = 0

Box = 1

Panel = 2

WinPanel = 3

HLine = 4

VLine = 5

StyledPanel = 6

Shape_Mask = 15

class StyleMask(value)

Bases: enum.Enum

An enumeration.

Shadow_Mask = 240

Shape_Mask = 15

StyledPanel = 6

Sunken = 48

VLine = 5

WinPanel = 3

acceptDrops(self) → bool

accessibleDescription(self) → str

accessibleName(self) → str

actionEvent(self, a0: QActionEvent)

actions(self) → List[QAction]

activateWindow(self)

addAction(self, action: QAction)

addActions(self, actions: Iterable[QAction])

adjustSize(self)

autoFillBackground(self) → bool

backgroundRole(self) → QPalette.ColorRole

baseSize(self) → QSize

blockSignals(self, b: bool) → bool

changeEvent(self, a0: QEvent)

childAt(self, p: QPoint) → QWidget

childAt(self, ax: int, ay: int) → QWidget

childEvent(self, a0: QChildEvent)

children(self) → List[QObject]

childrenRect(self) → QRect

childrenRegion(self) → QRegion

clearFocus(self)

clearMask(self)

close(self) → bool

closeEvent(self, a0: QCloseEvent)

colorCount(self) → int

connectNotify(self, signal: QMetaMethod)

contentsMargins(self) → QMargins

contentsRect(self) → QRect

contextMenuEvent(self, a0: QContextMenuEvent)

contextMenuPolicy(self) → Qt.ContextMenuPolicy

create(self, window: PyQt6.sip.voidptr = 0, initializeWindow: bool = True, destroyOldWindow: bool = True)

createWindowContainer(window: QWindow, parent: typing.Optional[QWidget] = None, flags: Qt.WindowType = Qt.WindowFlags()) → QWidget

cursor(self) → QCursor

customContextMenuRequested

customContextMenuRequested(self, pos: QPoint) [signal]

customEvent(self, a0: QEvent)

deleteLater(self)

depth(self) → int

destroy(self, destroyWindow: bool = True, destroySubWindows: bool = True)

destroyed

destroyed(self, object: typing.Optional[QObject] = None) [signal]

devType(self) → int

devicePixelRatio(self) → float

devicePixelRatioF(self) → float

devicePixelRatioFScale() → float

disconnect(a0: QMetaObject.Connection) → bool

disconnect(self) → None

disconnectNotify(self, signal: QMetaMethod)

dragEnterEvent(self, a0: QDragEnterEvent)

dragLeaveEvent(self, a0: QDragLeaveEvent)

dragMoveEvent(self, a0: QDragMoveEvent)

drawFrame(self, a0: QPainter)

dropEvent(self, a0: QDropEvent)

dumpObjectInfo(self)

dumpObjectTree(self)

dynamicPropertyNames(self) → List[QByteArray]

effectiveWinId(self) → PyQt6.sip.voidptr

ensurePolished(self)

enterEvent(self, event: QEnterEvent)

event(self, e: QEvent) → bool

eventFilter(self, a0: QObject, a1: QEvent) → bool

find(a0: PyQt6.sip.voidptr) → QWidget

findChild(self, type: type, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → QObject

findChild(self, types: Tuple, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → QObject

findChildren(self, type: type, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, types: Tuple, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, type: type, re: QRegularExpression, options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, types: Tuple, re: QRegularExpression, options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

focusInEvent(self, a0: QFocusEvent)

focusNextChild(self) → bool

focusNextPrevChild(self, next: bool) → bool

focusOutEvent(self, a0: QFocusEvent)

focusPolicy(self) → Qt.FocusPolicy

focusPreviousChild(self) → bool

focusProxy(self) → QWidget

focusWidget(self) → QWidget

font(self) → QFont

fontInfo(self) → QFontInfo

fontMetrics(self) → QFontMetrics

foregroundRole(self) → QPalette.ColorRole

frameGeometry(self) → QRect

frameRect(self) → QRect

frameShadow(self) → QFrame.Shadow

frameShape(self) → QFrame.Shape

frameSize(self) → QSize

frameStyle(self) → int

frameWidth(self) → int

geometry(self) → QRect

grab(self, rectangle: QRect = QRect(QPoint(0, 0), QSize(- 1, - 1))) → QPixmap

grabGesture(self, type: Qt.GestureType, flags: Qt.GestureFlag = Qt.GestureFlags())

grabKeyboard(self)

grabMouse(self)

grabMouse(self, a0: Union[QCursor, Qt.CursorShape]) → None

grabShortcut(self, key: Union[QKeySequence, QKeySequence.StandardKey, str, int], context: Qt.ShortcutContext = Qt.WindowShortcut) → int

graphicsEffect(self) → QGraphicsEffect

graphicsProxyWidget(self) → QGraphicsProxyWidget

hasFocus(self) → bool

hasHeightForWidth(self) → bool

hasMouseTracking(self) → bool

hasTabletTracking(self) → bool

height(self) → int

heightForWidth(self, a0: int) → int

heightMM(self) → int

hide(self)

hideEvent(self, a0: QHideEvent)

inherits(self, classname: str) → bool

initPainter(self, painter: QPainter)

initStyleOption(self, option: QStyleOptionFrame)

inputMethodEvent(self, a0: QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, a0: Qt.InputMethodQuery) → Any

insertAction(self, before: QAction, action: QAction)

insertActions(self, before: QAction, actions: Iterable[QAction])

installEventFilter(self, a0: QObject)

isActiveWindow(self) → bool

isAncestorOf(self, child: QWidget) → bool

isEnabled(self) → bool

isEnabledTo(self, a0: QWidget) → bool

isFullScreen(self) → bool

isHidden(self) → bool

isLeftToRight(self) → bool

isMaximized(self) → bool

isMinimized(self) → bool

isModal(self) → bool

isRightToLeft(self) → bool

isSignalConnected(self, signal: QMetaMethod) → bool

isVisible(self) → bool

isVisibleTo(self, a0: QWidget) → bool

isWidgetType(self) → bool

isWindow(self) → bool

isWindowModified(self) → bool

isWindowType(self) → bool

keyPressEvent(self, a0: QKeyEvent)

keyReleaseEvent(self, a0: QKeyEvent)

keyboardGrabber() → QWidget

killTimer(self, id: int)

layout(self) → QLayout

layoutDirection(self) → Qt.LayoutDirection

leaveEvent(self, a0: QEvent)

lineWidth(self) → int

locale(self) → QLocale

logicalDpiX(self) → int

logicalDpiY(self) → int

lower(self)

mapFrom(self, a0: QWidget, a1: QPoint) → QPoint

mapFrom(self, a0: QWidget, a1: QPointF) → QPointF

mapFromGlobal(self, a0: QPoint) → QPoint

mapFromGlobal(self, a0: QPointF) → QPointF

mapFromParent(self, a0: QPoint) → QPoint

mapFromParent(self, a0: QPointF) → QPointF

mapTo(self, a0: QWidget, a1: QPoint) → QPoint

mapTo(self, a0: QWidget, a1: QPointF) → QPointF

mapToGlobal(self, a0: QPoint) → QPoint

mapToGlobal(self, a0: QPointF) → QPointF

mapToParent(self, a0: QPoint) → QPoint

mapToParent(self, a0: QPointF) → QPointF

mask(self) → QRegion

maximumHeight(self) → int

maximumSize(self) → QSize

maximumWidth(self) → int

metaObject(self) → QMetaObject

metric(self, a0: QPaintDevice.PaintDeviceMetric) → int

midLineWidth(self) → int

minimumHeight(self) → int

minimumSize(self) → QSize

minimumSizeHint(self) → QSize

minimumWidth(self) → int

mouseDoubleClickEvent(self, a0: QMouseEvent)

mouseGrabber() → QWidget

mouseMoveEvent(self, a0: QMouseEvent)

mousePressEvent(self, a0: QMouseEvent)

mouseReleaseEvent(self, a0: QMouseEvent)

move(self, a0: QPoint)

move(self, ax: int, ay: int) → None

moveEvent(self, a0: QMoveEvent)

moveToThread(self, thread: QThread)

nativeEvent(self, eventType: QByteArray, message: PyQt6.sip.voidptr) → Tuple[bool, PyQt6.sip.voidptr]

nativeParentWidget(self) → QWidget

nextInFocusChain(self) → QWidget

normalGeometry(self) → QRect

objectName(self) → str

objectNameChanged

objectNameChanged(self, objectName: str) [signal]

overrideWindowFlags(self, type: Qt.WindowType)

overrideWindowState(self, state: Qt.WindowState)

paintEngine(self) → QPaintEngine

paintEvent(self, a0: QPaintEvent)

paintingActive(self) → bool

palette(self) → QPalette

parent(self) → QObject

parentWidget(self) → QWidget

physicalDpiX(self) → int

physicalDpiY(self) → int

pos(self) → QPoint

previousInFocusChain(self) → QWidget

property(self, name: str) → Any

pyqtConfigure(...)

Each keyword argument is either the name of a Qt property or a Qt signal. For properties the property is set to the given value which should be of an appropriate type. For signals the signal is connected to the given value which should be a callable.

raise_(self)

receivers(self, signal: PYQT_SIGNAL) → int

rect(self) → QRect

releaseKeyboard(self)

releaseMouse(self)

releaseShortcut(self, id: int)

removeAction(self, action: QAction)

removeEventFilter(self, a0: QObject)

render(self, target: QPaintDevice, targetOffset: QPoint = QPoint(), sourceRegion: QRegion = QRegion(), flags: QWidget.RenderFlag = QWidget.RenderFlags(QWidget.DrawWindowBackground | QWidget.DrawChildren))

render(self, painter: QPainter, targetOffset: QPoint = QPoint(), sourceRegion: QRegion = QRegion(), flags: QWidget.RenderFlag = QWidget.RenderFlags(QWidget.DrawWindowBackground | QWidget.DrawChildren)) → None

repaint(self)

repaint(self, x: int, y: int, w: int, h: int) → None

repaint(self, a0: QRect) → None

repaint(self, a0: QRegion) → None

resize(self, a0: QSize)

resize(self, w: int, h: int) → None

resizeEvent(self, a0: QResizeEvent)

restoreGeometry(self, geometry: QByteArray) → bool

saveGeometry(self) → QByteArray

screen(self) → QScreen

scroll(self, dx: int, dy: int)

scroll(self, dx: int, dy: int, a2: QRect) → None

sender(self) → QObject

senderSignalIndex(self) → int

setAcceptDrops(self, on: bool)

setAccessibleDescription(self, description: str)

setAccessibleName(self, name: str)

setAttribute(self, attribute: Qt.WidgetAttribute, on: bool = True)

setAutoFillBackground(self, enabled: bool)

setBackgroundRole(self, a0: QPalette.ColorRole)

setBaseSize(self, basew: int, baseh: int)

setBaseSize(self, s: QSize) → None

setContentsMargins(self, left: int, top: int, right: int, bottom: int)

setContentsMargins(self, margins: QMargins) → None

setContextMenuPolicy(self, policy: Qt.ContextMenuPolicy)

setCursor(self, a0: Union[QCursor, Qt.CursorShape])

setDisabled(self, a0: bool)

setEnabled(self, a0: bool)

setFixedHeight(self, h: int)

setFixedSize(self, a0: QSize)

setFixedSize(self, w: int, h: int) → None

setFixedWidth(self, w: int)

setFocus(self)

setFocus(self, reason: Qt.FocusReason) → None

setFocusPolicy(self, policy: Qt.FocusPolicy)

setFocusProxy(self, a0: QWidget)

setFont(self, a0: QFont)

setForegroundRole(self, a0: QPalette.ColorRole)

setFrameRect(self, a0: QRect)

setFrameShadow(self, a0: QFrame.Shadow)

setFrameShape(self, a0: QFrame.Shape)

setFrameStyle(self, a0: int)

setGeometry(self, a0: QRect)

setGeometry(self, ax: int, ay: int, aw: int, ah: int) → None

setGraphicsEffect(self, effect: QGraphicsEffect)

setHidden(self, hidden: bool)

setInputMethodHints(self, hints: Qt.InputMethodHint)

setLayout(self, a0: QLayout)

setLayoutDirection(self, direction: Qt.LayoutDirection)

setLineWidth(self, a0: int)

setLocale(self, locale: QLocale)

setMask(self, a0: QBitmap)

setMask(self, a0: QRegion) → None

setMaximumHeight(self, maxh: int)

setMaximumSize(self, maxw: int, maxh: int)

setMaximumSize(self, s: QSize) → None

setMaximumWidth(self, maxw: int)

setMidLineWidth(self, a0: int)

setMinimumHeight(self, minh: int)

setMinimumSize(self, minw: int, minh: int)

setMinimumSize(self, s: QSize) → None

setMinimumWidth(self, minw: int)

setMouseTracking(self, enable: bool)

setObjectName(self, name: str)

setPalette(self, a0: QPalette)

setParent(self, parent: QWidget)

setParent(self, parent: QWidget, f: Qt.WindowType) → None

setProperty(self, name: str, value: Any) → bool

setScreen(self, a0: QScreen)

setShortcutAutoRepeat(self, id: int, enabled: bool = True)

setShortcutEnabled(self, id: int, enabled: bool = True)

setSizeIncrement(self, w: int, h: int)

setSizeIncrement(self, s: QSize) → None

setSizePolicy(self, a0: QSizePolicy)

setSizePolicy(self, hor: QSizePolicy.Policy, ver: QSizePolicy.Policy) → None

setStatusTip(self, a0: str)

setStyle(self, a0: QStyle)

setStyleSheet(self, styleSheet: str)

setTabOrder(a0: QWidget, a1: QWidget)

setTabletTracking(self, enable: bool)

setToolTip(self, a0: str)

setToolTipDuration(self, msec: int)

setUpdatesEnabled(self, enable: bool)

setVisible(self, visible: bool)

setWhatsThis(self, a0: str)

setWindowFilePath(self, filePath: str)

setWindowFlag(self, a0: Qt.WindowType, on: bool = True)

setWindowFlags(self, type: Qt.WindowType)

setWindowIcon(self, icon: QIcon)

setWindowIconText(self, a0: str)

setWindowModality(self, windowModality: Qt.WindowModality)

setWindowModified(self, a0: bool)

setWindowOpacity(self, level: float)

setWindowRole(self, a0: str)

setWindowState(self, state: Qt.WindowState)

setWindowTitle(self, a0: str)

sharedPainter(self) → QPainter

show(self)

showEvent(self, a0: QShowEvent)

showFullScreen(self)

showMaximized(self)

showMinimized(self)

showNormal(self)

signalsBlocked(self) → bool

size(self) → QSize

sizeHint(self) → QSize

sizeIncrement(self) → QSize

sizePolicy(self) → QSizePolicy

stackUnder(self, a0: QWidget)

startTimer(self, interval: int, timerType: Qt.TimerType = Qt.CoarseTimer) → int

staticMetaObject = <PyQt6.QtCore.QMetaObject object>

statusTip(self) → str

style(self) → QStyle

styleSheet(self) → str

tabletEvent(self, a0: QTabletEvent)

testAttribute(self, attribute: Qt.WidgetAttribute) → bool

thread(self) → QThread

timerEvent(self, a0: QTimerEvent)

toolTip(self) → str

toolTipDuration(self) → int

tr(sourceText: str, disambiguation: typing.Optional[str] = None, n: int = - 1) → str

underMouse(self) → bool

ungrabGesture(self, type: Qt.GestureType)

unsetCursor(self)

unsetLayoutDirection(self)

unsetLocale(self)

update(self)

update(self, a0: QRect) → None

update(self, a0: QRegion) → None

update(self, ax: int, ay: int, aw: int, ah: int) → None

updateGeometry(self)

updateMicroFocus(self, query: Qt.InputMethodQuery = Qt.ImQueryAll)

updatesEnabled(self) → bool

visibleRegion(self) → QRegion

whatsThis(self) → str

wheelEvent(self, a0: QWheelEvent)

width(self) → int

widthMM(self) → int

winId(self) → PyQt6.sip.voidptr

window(self) → QWidget

windowFilePath(self) → str

windowFlags(self) → Qt.WindowType

windowHandle(self) → QWindow

windowIcon(self) → QIcon

windowIconChanged

windowIconChanged(self, icon: QIcon) [signal]

windowIconText(self) → str

windowIconTextChanged

windowIconTextChanged(self, iconText: str) [signal]

windowModality(self) → Qt.WindowModality

windowOpacity(self) → float

windowRole(self) → str

windowState(self) → Qt.WindowState

windowTitle(self) → str

windowTitleChanged

windowTitleChanged(self, title: str) [signal]

windowType(self) → Qt.WindowType

x(self) → int

y(self) → int

class schrodinger.application.bioluminate.sliderchart.SlidableLine(parent, axes, line, tolerance=7, border='high', shade_color='0.70', callback=None)

Bases: object

A line on a matplotlib plot that can be grabbed and moved by the user

__init__(parent, axes, line, tolerance=7, border='high', shade_color='0.70', callback=None)

Create a SlidableLine object

Parameters

• parent (SliderPlot object) – The matplotlib canvas these lines are plotted on

• axes (matplotlib Axes object) – The matplotlib axes these lines are plotted on

• line (matplotlib Line2D object) – the actual line that will be moved

• tolerance (int) – The amount that the user can “miss” the line and still grab it

• border (str) – either “high” or “low”, the role this line plays in bounding the box - high lines are those that bound the upper value of X or Y

• shade_color (str) – A matplotlib-recognized color string that the unselected areas will be shaded

• callback (callable) – Called when the slider line has been moved. The callback will receive the SlidableLine object that was moved.

onRelease(event)

Stop checking for movement when the mouse button is released

remove()

Remove this from the plot

class schrodinger.application.bioluminate.sliderchart.SlidableHLine(*args, **kwargs)

Bases: schrodinger.application.bioluminate.sliderchart.SlidableLine

A horizontal line on a matplotlib plot that can be grabbed and moved by the user

__init__(*args, **kwargs)

Create a SlidableHLine object

See parent class for argument documentation

getPosition()

Return the position of the line in data coordinates

Return type

float

Returns

The current position of the line in data coordinates

getAxisExtreme()

Return the most extreme (high or low) value this line should take

Return type

float

Returns

The most extreme value this line can take in data coordinates

setPosition(value)

Change the position of the line to value. However, we don’t allow the high/low boundary lines to cross, or to go off the plot.

Parameters

value (float) – The new y value to attempt to place the line at

onMotion(event)

Move the line if it is currently moving and the mouse moved

Parameters

event (matplotlib mouse event) – the event object generated by mouse movement

onPress(event)

Check to see if the user clicked this line

Parameters

event (matplotlib mouse event) – the event object generated by mouse click

onRelease(event)

Stop checking for movement when the mouse button is released

remove()

Remove this from the plot

class schrodinger.application.bioluminate.sliderchart.SlidableVLine(*args, **kwargs)

Bases: schrodinger.application.bioluminate.sliderchart.SlidableLine

A vertical line on a matplotlib plot that can be grabbed and moved by the user

__init__(*args, **kwargs)

Create a SlidableVLine object

See parent class for argument documentation

getPosition()

Return the position of the line in data coordinates

Return type

float

Returns

The current position of the line in data coordinates

setPosition(value)

Change the position of the line to value. However, we don’t allow the high/low boundary lines to cross, or to go off the plot.

Parameters

value (float) – The new x value to attempt to place the line at

getAxisExtreme()

Return the most extreme (high or low) value this line should take

Return type

float

Returns

The most extreme value this line can take in data coordinates

onMotion(event)

Move the line if it is currently moving and the mouse moved

Parameters

event (matplotlib mouse event) – the event object generated by mouse movement

onPress(event)

Check to see if the user clicked this line

Parameters

event (matplotlib mouse event) – the event object generated by mouse click

onRelease(event)

Stop checking for movement when the mouse button is released

remove()

Remove this from the plot