schrodinger.protein.helm.helm_renderer module

class schrodinger.protein.helm.helm_renderer.HexColor(value)

Bases: enum.Enum

An enumeration.

Acidic = <PyQt6.QtGui.QColor object>

Basic = <PyQt6.QtGui.QColor object>

Aliphatic = <PyQt6.QtGui.QColor object>

Aromatic = <PyQt6.QtGui.QColor object>

Hydrophilic = <PyQt6.QtGui.QColor object>

Thiol = <PyQt6.QtGui.QColor object>

IminoAcid = <PyQt6.QtGui.QColor object>

VariablePolar = <PyQt6.QtGui.QColor object>

NABackBone = <PyQt6.QtGui.QColor object>

Adenine = <PyQt6.QtGui.QColor object>

Cytosine = <PyQt6.QtGui.QColor object>

Guanine = <PyQt6.QtGui.QColor object>

Thymine = <PyQt6.QtGui.QColor object>

Uracil = <PyQt6.QtGui.QColor object>

Other = <PyQt6.QtGui.QColor object>

Black = <PyQt6.QtGui.QColor object>

Gray3 = <PyQt6.QtGui.QColor object>

Gray4 = <PyQt6.QtGui.QColor object>

Gray6 = <PyQt6.QtGui.QColor object>

DarkRed = <PyQt6.QtGui.QColor object>

White = <PyQt6.QtGui.QColor object>

class schrodinger.protein.helm.helm_renderer.ZOrder(value)

Bases: enum.IntEnum

Enum describing which layer (Z value) each GraphicsItem is drawn on.

BehindMonomer = 1

DefaultMonomerItem = 2

InFrontMonomer = 3

schrodinger.protein.helm.helm_renderer.get_polymer_type(monomer: rdkit.Chem.rdchem.Atom) → schrodinger.protein.helm._helm_parser.PolymerType

schrodinger.protein.helm.helm_renderer.protect_painter(painter_method: Callable) → Callable

Decorator which can be applied to paint methods to ensure the state of the painter isn’t modified

Parameters

painter_method – method to wrap. Should take a painter as its first argument

Returns

wrapped function

class schrodinger.protein.helm.helm_renderer.HelmMonomer(res_name: str, polymer_type: schrodinger.protein.helm._helm_parser.PolymerType, is_branch: bool, position: PyQt6.QtCore.QPointF)

Bases: object

res_name: str

polymer_type: schrodinger.protein.helm._helm_parser.PolymerType

is_branch: bool

position: PyQt6.QtCore.QPointF

property is_standard: bool

property is_d_amino_acid: bool

property is_nucleotide_sugar: bool

property is_nucleotide_phosphate: bool

property is_nucleotide_backbone: bool

__init__(res_name: str, polymer_type: schrodinger.protein.helm._helm_parser.PolymerType, is_branch: bool, position: PyQt6.QtCore.QPointF) → None

class schrodinger.protein.helm.helm_renderer.HelmMonomerTextLabel(text: str, size: int = 14, weight: PyQt6.QtGui.QFont.Weight = Weight.Normal, color: schrodinger.protein.helm.helm_renderer.HexColor = HexColor.Black, parent=None)

Bases: PyQt6.QtWidgets.QGraphicsTextItem

GraphicsItem used for text labeling all monomers. Sets default font, etc., specific to the Helm rendering use case.

__init__(text: str, size: int = 14, weight: PyQt6.QtGui.QFont.Weight = Weight.Normal, color: schrodinger.protein.helm.helm_renderer.HexColor = HexColor.Black, parent=None)

setFormattedText(text: str)

Set the label’s text, with proper HTML formatting and centering.

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

adjustSize(self)

advance(self, int)

blockSignals(self, bool) → bool

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

cacheMode(self) → QGraphicsItem.CacheMode

childEvent(self, QChildEvent)

childItems(self) → List[QGraphicsItem]

children(self) → List[QObject]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

connectNotify(self, QMetaMethod)

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

customEvent(self, QEvent)

data(self, int) → Any

defaultTextColor(self) → QColor

deleteLater(self)

destroyed

destroyed(self, object: QObject = None) [signal]

deviceTransform(self, QTransform) → QTransform

disconnect(QMetaObject.Connection) → bool

disconnect(self) → None

disconnectNotify(self, QMetaMethod)

document(self) → QTextDocument

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

dumpObjectInfo(self)

dumpObjectTree(self)

dynamicPropertyNames(self) → List[QByteArray]

effectiveOpacity(self) → float

enabledChanged

enabledChanged(self) [signal]

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

HelmMonomerTextLabel.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

event(self, QEvent) → bool

eventFilter(self, QObject, QEvent) → bool

filtersChildEvents(self) → bool

findChild(self, type, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → QObject

findChild(self, Tuple, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → QObject

findChildren(self, type, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, Tuple, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, type, QRegularExpression, options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, Tuple, QRegularExpression, options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

font(self) → QFont

grabGesture(self, Qt.GestureType, flags: Qt.GestureFlag = Qt.GestureFlags())

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inherits(self, str) → bool

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installEventFilter(self, QObject)

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

HelmMonomerTextLabel.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isSignalConnected(self, QMetaMethod) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWidgetType(self) → bool

isWindow(self) → bool

isWindowType(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

killTimer(self, int)

linkActivated

linkActivated(self, str) [signal]

linkHovered

linkHovered(self, str) [signal]

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

HelmMonomerTextLabel.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

HelmMonomerTextLabel.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

HelmMonomerTextLabel.mapFromParent(self, float, float) -> QPointF

HelmMonomerTextLabel.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

HelmMonomerTextLabel.mapFromScene(self, float, float) -> QPointF

HelmMonomerTextLabel.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

HelmMonomerTextLabel.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

HelmMonomerTextLabel.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

HelmMonomerTextLabel.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

HelmMonomerTextLabel.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

HelmMonomerTextLabel.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

HelmMonomerTextLabel.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

HelmMonomerTextLabel.mapToItem(self, QGraphicsItem, float, float) -> QPointF

HelmMonomerTextLabel.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

HelmMonomerTextLabel.mapToParent(self, float, float) -> QPointF

HelmMonomerTextLabel.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

HelmMonomerTextLabel.mapToScene(self, float, float) -> QPointF

HelmMonomerTextLabel.mapToScene(self, float, float, float, float) -> QPolygonF

metaObject(self) → QMetaObject

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

HelmMonomerTextLabel.moveBy(self, float, float)

moveToThread(self, QThread)

objectName(self) → str

objectNameChanged

objectNameChanged(self, str) [signal]

opacity(self) → float

opacityChanged

opacityChanged(self) [signal]

opaqueArea(self) → QPainterPath

openExternalLinks(self) → bool

paint(self, QPainter, QStyleOptionGraphicsItem, QWidget)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parent(self) → QObject

parentChanged

parentChanged(self) [signal]

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pos(self) → QPointF

prepareGeometryChange(self)

property(self, str) → Any

pyqtConfigure(...)

Each keyword argument is either the name of a Qt property or a Qt signal. For properties the property is set to the given value which should be of an appropriate type. For signals the signal is connected to the given value which should be a callable.

receivers(self, PYQT_SIGNAL) → int

removeEventFilter(self, QObject)

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

rotationChanged

rotationChanged(self) [signal]

scale(self) → float

scaleChanged

scaleChanged(self) [signal]

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

HelmMonomerTextLabel.scroll(self, float, float, rect: QRectF = QRectF())

sender(self) → QObject

senderSignalIndex(self) → int

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setDefaultTextColor(self, Union[QColor, Qt.GlobalColor, int, QGradient])

setDocument(self, QTextDocument)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setFont(self, QFont)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setHtml(self, str)

setInputMethodHints(self, Qt.InputMethodHint)

setObjectName(self, str)

setOpacity(self, float)

setOpenExternalLinks(self, bool)

setPanelModality(self, QGraphicsItem.PanelModality)

setParent(self, QObject)

setParentItem(self, QGraphicsItem)

setPlainText(self, str)

setPos(self, QPointF)

HelmMonomerTextLabel.setPos(self, float, float) -> None

setProperty(self, str, Any) → bool

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setTabChangesFocus(self, bool)

setTextCursor(self, QTextCursor)

setTextInteractionFlags(self, Qt.TextInteractionFlag)

setTextWidth(self, float)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

HelmMonomerTextLabel.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

shape(self) → QPainterPath

show(self)

signalsBlocked(self) → bool

stackBefore(self, QGraphicsItem)

startTimer(self, int, timerType: Qt.TimerType = Qt.CoarseTimer) → int

staticMetaObject = <PyQt6.QtCore.QMetaObject object>

tabChangesFocus(self) → bool

textCursor(self) → QTextCursor

textInteractionFlags(self) → Qt.TextInteractionFlag

textWidth(self) → float

thread(self) → QThread

timerEvent(self, QTimerEvent)

toGraphicsObject(self) → QGraphicsObject

toHtml(self) → str

toPlainText(self) → str

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

tr(str, disambiguation: str = None, n: int = - 1) → str

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabGesture(self, Qt.GestureType)

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

HelmMonomerTextLabel.update(self, float, float, float, float) -> None

updateMicroFocus(self)

visibleChanged

visibleChanged(self) [signal]

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

xChanged

xChanged(self) [signal]

y(self) → float

yChanged

yChanged(self) [signal]

zChanged

zChanged(self) [signal]

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.HelmMonomerItemMixin(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

Bases: object

Mixin which establishes the necessary methods to render the monomer item in the QGraphicsScene. Handles position offsets so that the center of the shape appears at the position set in the monomer object

Also defines default brush and pen settings

MAGNIFY_FACTOR = 1.0

DEFAULT_X_RADIUS = 12.5

DEFAULT_Y_RADIUS = 12.5

__init__(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

setup()

Initialize the current monomer

getMonomerResizingProposal(text_x_radius: float, text_y_radius: float) → Tuple[float, float]

Method with class-specific logic to figure out how to resize the monomer given the final size of its text label. Args are the text label’s size; returns size of the smallest monomer that properly contains the text.

setupTextLabel()

Updates the geometry of the monomer and monomer label in order to prevent the label text from overflowing the monomer shape.

setShape() → None

Set the shape and/or bounding box of the monomer. Must be implemented by inheriting classes for them to be rendered in the scene

class schrodinger.protein.helm.helm_renderer.AminoAcidMonomerBase(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

Bases: schrodinger.protein.helm.helm_renderer.HelmMonomerItemMixin, PyQt6.QtWidgets.QGraphicsRectItem

Item representing an amino acid’s position and graphical details in the scene

setShape()

Set the size of the monomer rectangle

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DEFAULT_X_RADIUS = 12.5

DEFAULT_Y_RADIUS = 12.5

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

MAGNIFY_FACTOR = 1.0

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

AminoAcidMonomerBase.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

getMonomerResizingProposal(text_x_radius: float, text_y_radius: float) → Tuple[float, float]

Method with class-specific logic to figure out how to resize the monomer given the final size of its text label. Args are the text label’s size; returns size of the smallest monomer that properly contains the text.

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

AminoAcidMonomerBase.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

AminoAcidMonomerBase.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

AminoAcidMonomerBase.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

AminoAcidMonomerBase.mapFromParent(self, float, float) -> QPointF

AminoAcidMonomerBase.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

AminoAcidMonomerBase.mapFromScene(self, float, float) -> QPointF

AminoAcidMonomerBase.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

AminoAcidMonomerBase.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

AminoAcidMonomerBase.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

AminoAcidMonomerBase.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

AminoAcidMonomerBase.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

AminoAcidMonomerBase.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

AminoAcidMonomerBase.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

AminoAcidMonomerBase.mapToItem(self, QGraphicsItem, float, float) -> QPointF

AminoAcidMonomerBase.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

AminoAcidMonomerBase.mapToParent(self, float, float) -> QPointF

AminoAcidMonomerBase.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

AminoAcidMonomerBase.mapToScene(self, float, float) -> QPointF

AminoAcidMonomerBase.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

AminoAcidMonomerBase.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

rect(self) → QRectF

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

AminoAcidMonomerBase.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

AminoAcidMonomerBase.setPos(self, float, float) -> None

setRect(self, QRectF)

AminoAcidMonomerBase.setRect(self, float, float, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

AminoAcidMonomerBase.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

setup()

Initialize the current monomer

setupTextLabel()

Updates the geometry of the monomer and monomer label in order to prevent the label text from overflowing the monomer shape.

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

AminoAcidMonomerBase.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.StandardAminoAcidMonomerItem(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

Bases: schrodinger.protein.helm.helm_renderer.AminoAcidMonomerBase

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DEFAULT_X_RADIUS = 12.5

DEFAULT_Y_RADIUS = 12.5

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

MAGNIFY_FACTOR = 1.0

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

StandardAminoAcidMonomerItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

getMonomerResizingProposal(text_x_radius: float, text_y_radius: float) → Tuple[float, float]

Method with class-specific logic to figure out how to resize the monomer given the final size of its text label. Args are the text label’s size; returns size of the smallest monomer that properly contains the text.

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

StandardAminoAcidMonomerItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

StandardAminoAcidMonomerItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

StandardAminoAcidMonomerItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

StandardAminoAcidMonomerItem.mapFromParent(self, float, float) -> QPointF

StandardAminoAcidMonomerItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

StandardAminoAcidMonomerItem.mapFromScene(self, float, float) -> QPointF

StandardAminoAcidMonomerItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

StandardAminoAcidMonomerItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

StandardAminoAcidMonomerItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

StandardAminoAcidMonomerItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

StandardAminoAcidMonomerItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

StandardAminoAcidMonomerItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

StandardAminoAcidMonomerItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

StandardAminoAcidMonomerItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

StandardAminoAcidMonomerItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

StandardAminoAcidMonomerItem.mapToParent(self, float, float) -> QPointF

StandardAminoAcidMonomerItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

StandardAminoAcidMonomerItem.mapToScene(self, float, float) -> QPointF

StandardAminoAcidMonomerItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

StandardAminoAcidMonomerItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

rect(self) → QRectF

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

StandardAminoAcidMonomerItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

StandardAminoAcidMonomerItem.setPos(self, float, float) -> None

setRect(self, QRectF)

StandardAminoAcidMonomerItem.setRect(self, float, float, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setShape()

Set the size of the monomer rectangle

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

StandardAminoAcidMonomerItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

setup()

Initialize the current monomer

setupTextLabel()

Updates the geometry of the monomer and monomer label in order to prevent the label text from overflowing the monomer shape.

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

StandardAminoAcidMonomerItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.DAminoAcidMonomerItem(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

Bases: schrodinger.protein.helm.helm_renderer.AminoAcidMonomerBase

DEFAULT_X_RADIUS = 16.0

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DEFAULT_Y_RADIUS = 12.5

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

MAGNIFY_FACTOR = 1.0

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

DAminoAcidMonomerItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

getMonomerResizingProposal(text_x_radius: float, text_y_radius: float) → Tuple[float, float]

Method with class-specific logic to figure out how to resize the monomer given the final size of its text label. Args are the text label’s size; returns size of the smallest monomer that properly contains the text.

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

DAminoAcidMonomerItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

DAminoAcidMonomerItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

DAminoAcidMonomerItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

DAminoAcidMonomerItem.mapFromParent(self, float, float) -> QPointF

DAminoAcidMonomerItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

DAminoAcidMonomerItem.mapFromScene(self, float, float) -> QPointF

DAminoAcidMonomerItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

DAminoAcidMonomerItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

DAminoAcidMonomerItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

DAminoAcidMonomerItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

DAminoAcidMonomerItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

DAminoAcidMonomerItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

DAminoAcidMonomerItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

DAminoAcidMonomerItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

DAminoAcidMonomerItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

DAminoAcidMonomerItem.mapToParent(self, float, float) -> QPointF

DAminoAcidMonomerItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

DAminoAcidMonomerItem.mapToScene(self, float, float) -> QPointF

DAminoAcidMonomerItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

DAminoAcidMonomerItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

rect(self) → QRectF

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

DAminoAcidMonomerItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

DAminoAcidMonomerItem.setPos(self, float, float) -> None

setRect(self, QRectF)

DAminoAcidMonomerItem.setRect(self, float, float, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setShape()

Set the size of the monomer rectangle

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

DAminoAcidMonomerItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

setup()

Initialize the current monomer

setupTextLabel()

Updates the geometry of the monomer and monomer label in order to prevent the label text from overflowing the monomer shape.

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

DAminoAcidMonomerItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.OtherAminoAcidMonomerItem(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

Bases: schrodinger.protein.helm.helm_renderer.AminoAcidMonomerBase

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DEFAULT_X_RADIUS = 12.5

DEFAULT_Y_RADIUS = 12.5

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

MAGNIFY_FACTOR = 1.0

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

OtherAminoAcidMonomerItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

getMonomerResizingProposal(text_x_radius: float, text_y_radius: float) → Tuple[float, float]

Method with class-specific logic to figure out how to resize the monomer given the final size of its text label. Args are the text label’s size; returns size of the smallest monomer that properly contains the text.

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

OtherAminoAcidMonomerItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

OtherAminoAcidMonomerItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

OtherAminoAcidMonomerItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

OtherAminoAcidMonomerItem.mapFromParent(self, float, float) -> QPointF

OtherAminoAcidMonomerItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

OtherAminoAcidMonomerItem.mapFromScene(self, float, float) -> QPointF

OtherAminoAcidMonomerItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

OtherAminoAcidMonomerItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

OtherAminoAcidMonomerItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

OtherAminoAcidMonomerItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

OtherAminoAcidMonomerItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

OtherAminoAcidMonomerItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

OtherAminoAcidMonomerItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

OtherAminoAcidMonomerItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

OtherAminoAcidMonomerItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

OtherAminoAcidMonomerItem.mapToParent(self, float, float) -> QPointF

OtherAminoAcidMonomerItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

OtherAminoAcidMonomerItem.mapToScene(self, float, float) -> QPointF

OtherAminoAcidMonomerItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

OtherAminoAcidMonomerItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

rect(self) → QRectF

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

OtherAminoAcidMonomerItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

OtherAminoAcidMonomerItem.setPos(self, float, float) -> None

setRect(self, QRectF)

OtherAminoAcidMonomerItem.setRect(self, float, float, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setShape()

Set the size of the monomer rectangle

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

OtherAminoAcidMonomerItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

setup()

Initialize the current monomer

setupTextLabel()

Updates the geometry of the monomer and monomer label in order to prevent the label text from overflowing the monomer shape.

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

OtherAminoAcidMonomerItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.BBPhosphateMonomerBase(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

Bases: schrodinger.protein.helm.helm_renderer.HelmMonomerItemMixin, PyQt6.QtWidgets.QGraphicsEllipseItem

Item representing a nucleic acid backbone phosphate group’s position and graphical details in the scene

MAGNIFY_FACTOR = 1.05

getMonomerResizingProposal(text_x_radius: float, text_y_radius: float) → Tuple[float, float]

Compute the size of the smallest monomer GraphicsItem that can fit the text label, given that the monomer is ellipse-shaped.

setShape()

Set the size of the monomer ellipse

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DEFAULT_X_RADIUS = 12.5

DEFAULT_Y_RADIUS = 12.5

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

BBPhosphateMonomerBase.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

BBPhosphateMonomerBase.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

BBPhosphateMonomerBase.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

BBPhosphateMonomerBase.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

BBPhosphateMonomerBase.mapFromParent(self, float, float) -> QPointF

BBPhosphateMonomerBase.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

BBPhosphateMonomerBase.mapFromScene(self, float, float) -> QPointF

BBPhosphateMonomerBase.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

BBPhosphateMonomerBase.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

BBPhosphateMonomerBase.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

BBPhosphateMonomerBase.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

BBPhosphateMonomerBase.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

BBPhosphateMonomerBase.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

BBPhosphateMonomerBase.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

BBPhosphateMonomerBase.mapToItem(self, QGraphicsItem, float, float) -> QPointF

BBPhosphateMonomerBase.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

BBPhosphateMonomerBase.mapToParent(self, float, float) -> QPointF

BBPhosphateMonomerBase.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

BBPhosphateMonomerBase.mapToScene(self, float, float) -> QPointF

BBPhosphateMonomerBase.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

BBPhosphateMonomerBase.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

rect(self) → QRectF

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

BBPhosphateMonomerBase.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

BBPhosphateMonomerBase.setPos(self, float, float) -> None

setRect(self, QRectF)

BBPhosphateMonomerBase.setRect(self, float, float, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setSpanAngle(self, int)

setStartAngle(self, int)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

BBPhosphateMonomerBase.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

setup()

Initialize the current monomer

setupTextLabel()

Updates the geometry of the monomer and monomer label in order to prevent the label text from overflowing the monomer shape.

shape(self) → QPainterPath

show(self)

spanAngle(self) → int

stackBefore(self, QGraphicsItem)

startAngle(self) → int

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

BBPhosphateMonomerBase.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.BBStandardPhosphateMonomerItem(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

Bases: schrodinger.protein.helm.helm_renderer.BBPhosphateMonomerBase

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DEFAULT_X_RADIUS = 12.5

DEFAULT_Y_RADIUS = 12.5

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

MAGNIFY_FACTOR = 1.05

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

BBStandardPhosphateMonomerItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

getMonomerResizingProposal(text_x_radius: float, text_y_radius: float) → Tuple[float, float]

Compute the size of the smallest monomer GraphicsItem that can fit the text label, given that the monomer is ellipse-shaped.

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

BBStandardPhosphateMonomerItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

BBStandardPhosphateMonomerItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

BBStandardPhosphateMonomerItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

BBStandardPhosphateMonomerItem.mapFromParent(self, float, float) -> QPointF

BBStandardPhosphateMonomerItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

BBStandardPhosphateMonomerItem.mapFromScene(self, float, float) -> QPointF

BBStandardPhosphateMonomerItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

BBStandardPhosphateMonomerItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

BBStandardPhosphateMonomerItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

BBStandardPhosphateMonomerItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

BBStandardPhosphateMonomerItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

BBStandardPhosphateMonomerItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

BBStandardPhosphateMonomerItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

BBStandardPhosphateMonomerItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

BBStandardPhosphateMonomerItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

BBStandardPhosphateMonomerItem.mapToParent(self, float, float) -> QPointF

BBStandardPhosphateMonomerItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

BBStandardPhosphateMonomerItem.mapToScene(self, float, float) -> QPointF

BBStandardPhosphateMonomerItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

BBStandardPhosphateMonomerItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

rect(self) → QRectF

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

BBStandardPhosphateMonomerItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

BBStandardPhosphateMonomerItem.setPos(self, float, float) -> None

setRect(self, QRectF)

BBStandardPhosphateMonomerItem.setRect(self, float, float, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setShape()

Set the size of the monomer ellipse

setSpanAngle(self, int)

setStartAngle(self, int)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

BBStandardPhosphateMonomerItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

setup()

Initialize the current monomer

setupTextLabel()

Updates the geometry of the monomer and monomer label in order to prevent the label text from overflowing the monomer shape.

shape(self) → QPainterPath

show(self)

spanAngle(self) → int

stackBefore(self, QGraphicsItem)

startAngle(self) → int

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

BBStandardPhosphateMonomerItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.BBModifiedPhosphateMonomerItem(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

Bases: schrodinger.protein.helm.helm_renderer.BBPhosphateMonomerBase

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DEFAULT_X_RADIUS = 12.5

DEFAULT_Y_RADIUS = 12.5

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

MAGNIFY_FACTOR = 1.05

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

BBModifiedPhosphateMonomerItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

getMonomerResizingProposal(text_x_radius: float, text_y_radius: float) → Tuple[float, float]

Compute the size of the smallest monomer GraphicsItem that can fit the text label, given that the monomer is ellipse-shaped.

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

BBModifiedPhosphateMonomerItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

BBModifiedPhosphateMonomerItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

BBModifiedPhosphateMonomerItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

BBModifiedPhosphateMonomerItem.mapFromParent(self, float, float) -> QPointF

BBModifiedPhosphateMonomerItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

BBModifiedPhosphateMonomerItem.mapFromScene(self, float, float) -> QPointF

BBModifiedPhosphateMonomerItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

BBModifiedPhosphateMonomerItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

BBModifiedPhosphateMonomerItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

BBModifiedPhosphateMonomerItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

BBModifiedPhosphateMonomerItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

BBModifiedPhosphateMonomerItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

BBModifiedPhosphateMonomerItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

BBModifiedPhosphateMonomerItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

BBModifiedPhosphateMonomerItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

BBModifiedPhosphateMonomerItem.mapToParent(self, float, float) -> QPointF

BBModifiedPhosphateMonomerItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

BBModifiedPhosphateMonomerItem.mapToScene(self, float, float) -> QPointF

BBModifiedPhosphateMonomerItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

BBModifiedPhosphateMonomerItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

rect(self) → QRectF

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

BBModifiedPhosphateMonomerItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

BBModifiedPhosphateMonomerItem.setPos(self, float, float) -> None

setRect(self, QRectF)

BBModifiedPhosphateMonomerItem.setRect(self, float, float, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setShape()

Set the size of the monomer ellipse

setSpanAngle(self, int)

setStartAngle(self, int)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

BBModifiedPhosphateMonomerItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

setup()

Initialize the current monomer

setupTextLabel()

Updates the geometry of the monomer and monomer label in order to prevent the label text from overflowing the monomer shape.

shape(self) → QPainterPath

show(self)

spanAngle(self) → int

stackBefore(self, QGraphicsItem)

startAngle(self) → int

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

BBModifiedPhosphateMonomerItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.BBSugarMonomerBase(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

Bases: schrodinger.protein.helm.helm_renderer.HelmMonomerItemMixin, PyQt6.QtWidgets.QGraphicsRectItem

Item representing a nucleic acid backbone sugar group’s position and graphical details in the scene. Used for both ribose and deoxyribose.

setShape()

Set the size of the monomer rectangle

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DEFAULT_X_RADIUS = 12.5

DEFAULT_Y_RADIUS = 12.5

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

MAGNIFY_FACTOR = 1.0

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

BBSugarMonomerBase.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

getMonomerResizingProposal(text_x_radius: float, text_y_radius: float) → Tuple[float, float]

Method with class-specific logic to figure out how to resize the monomer given the final size of its text label. Args are the text label’s size; returns size of the smallest monomer that properly contains the text.

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

BBSugarMonomerBase.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

BBSugarMonomerBase.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

BBSugarMonomerBase.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

BBSugarMonomerBase.mapFromParent(self, float, float) -> QPointF

BBSugarMonomerBase.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

BBSugarMonomerBase.mapFromScene(self, float, float) -> QPointF

BBSugarMonomerBase.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

BBSugarMonomerBase.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

BBSugarMonomerBase.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

BBSugarMonomerBase.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

BBSugarMonomerBase.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

BBSugarMonomerBase.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

BBSugarMonomerBase.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

BBSugarMonomerBase.mapToItem(self, QGraphicsItem, float, float) -> QPointF

BBSugarMonomerBase.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

BBSugarMonomerBase.mapToParent(self, float, float) -> QPointF

BBSugarMonomerBase.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

BBSugarMonomerBase.mapToScene(self, float, float) -> QPointF

BBSugarMonomerBase.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

BBSugarMonomerBase.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

rect(self) → QRectF

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

BBSugarMonomerBase.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

BBSugarMonomerBase.setPos(self, float, float) -> None

setRect(self, QRectF)

BBSugarMonomerBase.setRect(self, float, float, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

BBSugarMonomerBase.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

setup()

Initialize the current monomer

setupTextLabel()

Updates the geometry of the monomer and monomer label in order to prevent the label text from overflowing the monomer shape.

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

BBSugarMonomerBase.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.BBStandardSugarMonomerItem(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

Bases: schrodinger.protein.helm.helm_renderer.BBSugarMonomerBase

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DEFAULT_X_RADIUS = 12.5

DEFAULT_Y_RADIUS = 12.5

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

MAGNIFY_FACTOR = 1.0

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

BBStandardSugarMonomerItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

getMonomerResizingProposal(text_x_radius: float, text_y_radius: float) → Tuple[float, float]

Method with class-specific logic to figure out how to resize the monomer given the final size of its text label. Args are the text label’s size; returns size of the smallest monomer that properly contains the text.

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

BBStandardSugarMonomerItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

BBStandardSugarMonomerItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

BBStandardSugarMonomerItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

BBStandardSugarMonomerItem.mapFromParent(self, float, float) -> QPointF

BBStandardSugarMonomerItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

BBStandardSugarMonomerItem.mapFromScene(self, float, float) -> QPointF

BBStandardSugarMonomerItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

BBStandardSugarMonomerItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

BBStandardSugarMonomerItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

BBStandardSugarMonomerItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

BBStandardSugarMonomerItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

BBStandardSugarMonomerItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

BBStandardSugarMonomerItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

BBStandardSugarMonomerItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

BBStandardSugarMonomerItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

BBStandardSugarMonomerItem.mapToParent(self, float, float) -> QPointF

BBStandardSugarMonomerItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

BBStandardSugarMonomerItem.mapToScene(self, float, float) -> QPointF

BBStandardSugarMonomerItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

BBStandardSugarMonomerItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

rect(self) → QRectF

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

BBStandardSugarMonomerItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

BBStandardSugarMonomerItem.setPos(self, float, float) -> None

setRect(self, QRectF)

BBStandardSugarMonomerItem.setRect(self, float, float, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setShape()

Set the size of the monomer rectangle

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

BBStandardSugarMonomerItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

setup()

Initialize the current monomer

setupTextLabel()

Updates the geometry of the monomer and monomer label in order to prevent the label text from overflowing the monomer shape.

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

BBStandardSugarMonomerItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.BBModifiedSugarMonomerItem(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

Bases: schrodinger.protein.helm.helm_renderer.BBSugarMonomerBase

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DEFAULT_X_RADIUS = 12.5

DEFAULT_Y_RADIUS = 12.5

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

MAGNIFY_FACTOR = 1.0

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

BBModifiedSugarMonomerItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

getMonomerResizingProposal(text_x_radius: float, text_y_radius: float) → Tuple[float, float]

Method with class-specific logic to figure out how to resize the monomer given the final size of its text label. Args are the text label’s size; returns size of the smallest monomer that properly contains the text.

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

BBModifiedSugarMonomerItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

BBModifiedSugarMonomerItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

BBModifiedSugarMonomerItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

BBModifiedSugarMonomerItem.mapFromParent(self, float, float) -> QPointF

BBModifiedSugarMonomerItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

BBModifiedSugarMonomerItem.mapFromScene(self, float, float) -> QPointF

BBModifiedSugarMonomerItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

BBModifiedSugarMonomerItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

BBModifiedSugarMonomerItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

BBModifiedSugarMonomerItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

BBModifiedSugarMonomerItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

BBModifiedSugarMonomerItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

BBModifiedSugarMonomerItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

BBModifiedSugarMonomerItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

BBModifiedSugarMonomerItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

BBModifiedSugarMonomerItem.mapToParent(self, float, float) -> QPointF

BBModifiedSugarMonomerItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

BBModifiedSugarMonomerItem.mapToScene(self, float, float) -> QPointF

BBModifiedSugarMonomerItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

BBModifiedSugarMonomerItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

rect(self) → QRectF

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

BBModifiedSugarMonomerItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

BBModifiedSugarMonomerItem.setPos(self, float, float) -> None

setRect(self, QRectF)

BBModifiedSugarMonomerItem.setRect(self, float, float, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setShape()

Set the size of the monomer rectangle

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

BBModifiedSugarMonomerItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

setup()

Initialize the current monomer

setupTextLabel()

Updates the geometry of the monomer and monomer label in order to prevent the label text from overflowing the monomer shape.

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

BBModifiedSugarMonomerItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.NABaseMonomerBase(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

Bases: schrodinger.protein.helm.helm_renderer.HelmMonomerItemMixin, PyQt6.QtWidgets.QGraphicsPolygonItem

Item representing a nucleobase’s position and graphical details in the scene

MAGNIFY_FACTOR = 1.15

getMonomerResizingProposal(text_x_radius: float, text_y_radius: float) → Tuple[float, float]

Compute the size of the smallest monomer GraphicsItem that can fit the text label, given that the monomer is diamond-shaped.

getPolygonVertices() → List[PyQt6.QtCore.QPointF]

Get the polygon vertices to create the required diamond shape

Returns

A list of vertices in clockwise order

setShape()

Set the size and vertices of the monomer item diamond

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DEFAULT_X_RADIUS = 12.5

DEFAULT_Y_RADIUS = 12.5

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

NABaseMonomerBase.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

fillRule(self) → Qt.FillRule

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

NABaseMonomerBase.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

NABaseMonomerBase.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

NABaseMonomerBase.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

NABaseMonomerBase.mapFromParent(self, float, float) -> QPointF

NABaseMonomerBase.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

NABaseMonomerBase.mapFromScene(self, float, float) -> QPointF

NABaseMonomerBase.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

NABaseMonomerBase.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

NABaseMonomerBase.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

NABaseMonomerBase.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

NABaseMonomerBase.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

NABaseMonomerBase.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

NABaseMonomerBase.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

NABaseMonomerBase.mapToItem(self, QGraphicsItem, float, float) -> QPointF

NABaseMonomerBase.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

NABaseMonomerBase.mapToParent(self, float, float) -> QPointF

NABaseMonomerBase.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

NABaseMonomerBase.mapToScene(self, float, float) -> QPointF

NABaseMonomerBase.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

NABaseMonomerBase.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

polygon(self) → QPolygonF

pos(self) → QPointF

prepareGeometryChange(self)

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

NABaseMonomerBase.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFillRule(self, Qt.FillRule)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPolygon(self, QPolygonF)

setPos(self, QPointF)

NABaseMonomerBase.setPos(self, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

NABaseMonomerBase.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

setup()

Initialize the current monomer

setupTextLabel()

Updates the geometry of the monomer and monomer label in order to prevent the label text from overflowing the monomer shape.

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

NABaseMonomerBase.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.NAStandardBaseMonomerItem(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

Bases: schrodinger.protein.helm.helm_renderer.NABaseMonomerBase

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DEFAULT_X_RADIUS = 12.5

DEFAULT_Y_RADIUS = 12.5

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

MAGNIFY_FACTOR = 1.15

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

NAStandardBaseMonomerItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

fillRule(self) → Qt.FillRule

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

getMonomerResizingProposal(text_x_radius: float, text_y_radius: float) → Tuple[float, float]

Compute the size of the smallest monomer GraphicsItem that can fit the text label, given that the monomer is diamond-shaped.

getPolygonVertices() → List[PyQt6.QtCore.QPointF]

Get the polygon vertices to create the required diamond shape

Returns

A list of vertices in clockwise order

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

NAStandardBaseMonomerItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

NAStandardBaseMonomerItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

NAStandardBaseMonomerItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

NAStandardBaseMonomerItem.mapFromParent(self, float, float) -> QPointF

NAStandardBaseMonomerItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

NAStandardBaseMonomerItem.mapFromScene(self, float, float) -> QPointF

NAStandardBaseMonomerItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

NAStandardBaseMonomerItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

NAStandardBaseMonomerItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

NAStandardBaseMonomerItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

NAStandardBaseMonomerItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

NAStandardBaseMonomerItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

NAStandardBaseMonomerItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

NAStandardBaseMonomerItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

NAStandardBaseMonomerItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

NAStandardBaseMonomerItem.mapToParent(self, float, float) -> QPointF

NAStandardBaseMonomerItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

NAStandardBaseMonomerItem.mapToScene(self, float, float) -> QPointF

NAStandardBaseMonomerItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

NAStandardBaseMonomerItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

polygon(self) → QPolygonF

pos(self) → QPointF

prepareGeometryChange(self)

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

NAStandardBaseMonomerItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFillRule(self, Qt.FillRule)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPolygon(self, QPolygonF)

setPos(self, QPointF)

NAStandardBaseMonomerItem.setPos(self, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setShape()

Set the size and vertices of the monomer item diamond

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

NAStandardBaseMonomerItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

setup()

Initialize the current monomer

setupTextLabel()

Updates the geometry of the monomer and monomer label in order to prevent the label text from overflowing the monomer shape.

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

NAStandardBaseMonomerItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.NAUnnaturalBaseMonomerItem(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

Bases: schrodinger.protein.helm.helm_renderer.NABaseMonomerBase

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DEFAULT_X_RADIUS = 12.5

DEFAULT_Y_RADIUS = 12.5

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

MAGNIFY_FACTOR = 1.15

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

NAUnnaturalBaseMonomerItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

fillRule(self) → Qt.FillRule

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

getMonomerResizingProposal(text_x_radius: float, text_y_radius: float) → Tuple[float, float]

Compute the size of the smallest monomer GraphicsItem that can fit the text label, given that the monomer is diamond-shaped.

getPolygonVertices() → List[PyQt6.QtCore.QPointF]

Get the polygon vertices to create the required diamond shape

Returns

A list of vertices in clockwise order

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

NAUnnaturalBaseMonomerItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

NAUnnaturalBaseMonomerItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

NAUnnaturalBaseMonomerItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

NAUnnaturalBaseMonomerItem.mapFromParent(self, float, float) -> QPointF

NAUnnaturalBaseMonomerItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

NAUnnaturalBaseMonomerItem.mapFromScene(self, float, float) -> QPointF

NAUnnaturalBaseMonomerItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

NAUnnaturalBaseMonomerItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

NAUnnaturalBaseMonomerItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

NAUnnaturalBaseMonomerItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

NAUnnaturalBaseMonomerItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

NAUnnaturalBaseMonomerItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

NAUnnaturalBaseMonomerItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

NAUnnaturalBaseMonomerItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

NAUnnaturalBaseMonomerItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

NAUnnaturalBaseMonomerItem.mapToParent(self, float, float) -> QPointF

NAUnnaturalBaseMonomerItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

NAUnnaturalBaseMonomerItem.mapToScene(self, float, float) -> QPointF

NAUnnaturalBaseMonomerItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

NAUnnaturalBaseMonomerItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

polygon(self) → QPolygonF

pos(self) → QPointF

prepareGeometryChange(self)

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

NAUnnaturalBaseMonomerItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFillRule(self, Qt.FillRule)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPolygon(self, QPolygonF)

setPos(self, QPointF)

NAUnnaturalBaseMonomerItem.setPos(self, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setShape()

Set the size and vertices of the monomer item diamond

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

NAUnnaturalBaseMonomerItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

setup()

Initialize the current monomer

setupTextLabel()

Updates the geometry of the monomer and monomer label in order to prevent the label text from overflowing the monomer shape.

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

NAUnnaturalBaseMonomerItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

schrodinger.protein.helm.helm_renderer.monomer_item_factory(monomer: schrodinger.protein.helm.helm_renderer.HelmMonomer) → PyQt6.QtWidgets.QAbstractGraphicsShapeItem

Implement logic specifying different graphical styles (implemented by each child class) for a monomer.

Parameters

monomer – Monomer properties, determined by HelmScene.getMonomerData.

Returns

Graphics item to be added to the current QtWidgets.QGraphicsScene.

class schrodinger.protein.helm.helm_renderer.HelmConnector(start: schrodinger.protein.helm.helm_renderer.HelmMonomer, end: schrodinger.protein.helm.helm_renderer.HelmMonomer, is_cyclic: bool = False)

Bases: object

start: schrodinger.protein.helm.helm_renderer.HelmMonomer

end: schrodinger.protein.helm.helm_renderer.HelmMonomer

is_cyclic: bool = False

property has_branch: bool

property is_disulfide_bridge: bool

getPolymerType() → schrodinger.protein.helm._helm_parser.PolymerType

__init__(start: schrodinger.protein.helm.helm_renderer.HelmMonomer, end: schrodinger.protein.helm.helm_renderer.HelmMonomer, is_cyclic: bool = False) → None

class schrodinger.protein.helm.helm_renderer.LineHelmConnectorItem(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

Bases: schrodinger.protein.helm.helm_renderer._HelmConnectorBase, PyQt6.QtWidgets.QGraphicsLineItem

Base class for all connectors rendered as a straight line.

__init__(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

LineHelmConnectorItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

LineHelmConnectorItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

line(self) → QLineF

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

LineHelmConnectorItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

LineHelmConnectorItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

LineHelmConnectorItem.mapFromParent(self, float, float) -> QPointF

LineHelmConnectorItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

LineHelmConnectorItem.mapFromScene(self, float, float) -> QPointF

LineHelmConnectorItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

LineHelmConnectorItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

LineHelmConnectorItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

LineHelmConnectorItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

LineHelmConnectorItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

LineHelmConnectorItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

LineHelmConnectorItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

LineHelmConnectorItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

LineHelmConnectorItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

LineHelmConnectorItem.mapToParent(self, float, float) -> QPointF

LineHelmConnectorItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

LineHelmConnectorItem.mapToScene(self, float, float) -> QPointF

LineHelmConnectorItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

LineHelmConnectorItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

LineHelmConnectorItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setLine(self, QLineF)

LineHelmConnectorItem.setLine(self, float, float, float, float) -> None

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

LineHelmConnectorItem.setPos(self, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

LineHelmConnectorItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

LineHelmConnectorItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.PolylineHelmConnectorItem(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

Bases: schrodinger.protein.helm.helm_renderer._HelmConnectorBase, PyQt6.QtWidgets.QGraphicsPathItem

Base class for all connectors rendered as a polyline (”／‾＼”).

__init__(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

PolylineHelmConnectorItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

PolylineHelmConnectorItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

PolylineHelmConnectorItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

PolylineHelmConnectorItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

PolylineHelmConnectorItem.mapFromParent(self, float, float) -> QPointF

PolylineHelmConnectorItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

PolylineHelmConnectorItem.mapFromScene(self, float, float) -> QPointF

PolylineHelmConnectorItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

PolylineHelmConnectorItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

PolylineHelmConnectorItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

PolylineHelmConnectorItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

PolylineHelmConnectorItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

PolylineHelmConnectorItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

PolylineHelmConnectorItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

PolylineHelmConnectorItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

PolylineHelmConnectorItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

PolylineHelmConnectorItem.mapToParent(self, float, float) -> QPointF

PolylineHelmConnectorItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

PolylineHelmConnectorItem.mapToScene(self, float, float) -> QPointF

PolylineHelmConnectorItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

PolylineHelmConnectorItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

path(self) → QPainterPath

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

PolylineHelmConnectorItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPath(self, QPainterPath)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

PolylineHelmConnectorItem.setPos(self, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

PolylineHelmConnectorItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

PolylineHelmConnectorItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.ArrowheadConnectorMixin

Bases: object

Mixin for adding arrowheads to the start or end of a _HelmConnectorBase graphics item.

add_arrowhead(pos: PyQt6.QtCore.QPointF) → PyQt6.QtWidgets.QAbstractGraphicsShapeItem

class schrodinger.protein.helm.helm_renderer.AALinearConnectorItem(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

Bases: schrodinger.protein.helm.helm_renderer.LineHelmConnectorItem

Graphics Item representing a non-branching connector between two amino acids.

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

AALinearConnectorItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

AALinearConnectorItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

line(self) → QLineF

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

AALinearConnectorItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

AALinearConnectorItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

AALinearConnectorItem.mapFromParent(self, float, float) -> QPointF

AALinearConnectorItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

AALinearConnectorItem.mapFromScene(self, float, float) -> QPointF

AALinearConnectorItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

AALinearConnectorItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

AALinearConnectorItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

AALinearConnectorItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

AALinearConnectorItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

AALinearConnectorItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

AALinearConnectorItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

AALinearConnectorItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

AALinearConnectorItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

AALinearConnectorItem.mapToParent(self, float, float) -> QPointF

AALinearConnectorItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

AALinearConnectorItem.mapToScene(self, float, float) -> QPointF

AALinearConnectorItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

AALinearConnectorItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

AALinearConnectorItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setLine(self, QLineF)

AALinearConnectorItem.setLine(self, float, float, float, float) -> None

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

AALinearConnectorItem.setPos(self, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

AALinearConnectorItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

AALinearConnectorItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.AABranchingConnectorItem(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

Bases: schrodinger.protein.helm.helm_renderer.ArrowheadConnectorMixin, schrodinger.protein.helm.helm_renderer.LineHelmConnectorItem

Graphics Item representing a branching connector between two amino acids.

__init__(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

add_arrowhead(pos: PyQt6.QtCore.QPointF) → PyQt6.QtWidgets.QAbstractGraphicsShapeItem

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

AABranchingConnectorItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

AABranchingConnectorItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

line(self) → QLineF

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

AABranchingConnectorItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

AABranchingConnectorItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

AABranchingConnectorItem.mapFromParent(self, float, float) -> QPointF

AABranchingConnectorItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

AABranchingConnectorItem.mapFromScene(self, float, float) -> QPointF

AABranchingConnectorItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

AABranchingConnectorItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

AABranchingConnectorItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

AABranchingConnectorItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

AABranchingConnectorItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

AABranchingConnectorItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

AABranchingConnectorItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

AABranchingConnectorItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

AABranchingConnectorItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

AABranchingConnectorItem.mapToParent(self, float, float) -> QPointF

AABranchingConnectorItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

AABranchingConnectorItem.mapToScene(self, float, float) -> QPointF

AABranchingConnectorItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

AABranchingConnectorItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

AABranchingConnectorItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setLine(self, QLineF)

AABranchingConnectorItem.setLine(self, float, float, float, float) -> None

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

AABranchingConnectorItem.setPos(self, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

AABranchingConnectorItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

AABranchingConnectorItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.DisulfideConnectorMixin(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

Bases: schrodinger.protein.helm.helm_renderer.ArrowheadConnectorMixin

Mixin for representing disulfide bridges.

__init__(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

add_arrowhead(pos: PyQt6.QtCore.QPointF) → PyQt6.QtWidgets.QAbstractGraphicsShapeItem

class schrodinger.protein.helm.helm_renderer.DisulfideLinearConnectorItem(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

Bases: schrodinger.protein.helm.helm_renderer.DisulfideConnectorMixin, schrodinger.protein.helm.helm_renderer.PolylineHelmConnectorItem

Graphics Item representing disulfide bridges between two amino acids that have been laid out in a linear arrangement.

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

add_arrowhead(pos: PyQt6.QtCore.QPointF) → PyQt6.QtWidgets.QAbstractGraphicsShapeItem

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

brush(self) → QBrush

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

DisulfideLinearConnectorItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

DisulfideLinearConnectorItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

DisulfideLinearConnectorItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

DisulfideLinearConnectorItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

DisulfideLinearConnectorItem.mapFromParent(self, float, float) -> QPointF

DisulfideLinearConnectorItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

DisulfideLinearConnectorItem.mapFromScene(self, float, float) -> QPointF

DisulfideLinearConnectorItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

DisulfideLinearConnectorItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

DisulfideLinearConnectorItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

DisulfideLinearConnectorItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

DisulfideLinearConnectorItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

DisulfideLinearConnectorItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

DisulfideLinearConnectorItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

DisulfideLinearConnectorItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

DisulfideLinearConnectorItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

DisulfideLinearConnectorItem.mapToParent(self, float, float) -> QPointF

DisulfideLinearConnectorItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

DisulfideLinearConnectorItem.mapToScene(self, float, float) -> QPointF

DisulfideLinearConnectorItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

DisulfideLinearConnectorItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

path(self) → QPainterPath

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

DisulfideLinearConnectorItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPath(self, QPainterPath)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

DisulfideLinearConnectorItem.setPos(self, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

DisulfideLinearConnectorItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

DisulfideLinearConnectorItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.DisulfideCyclicConnectorItem(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

Bases: schrodinger.protein.helm.helm_renderer.DisulfideConnectorMixin, schrodinger.protein.helm.helm_renderer.LineHelmConnectorItem

Graphics Item representing disulfide bridges between two amino acids that have been laid out in a cyclic arrangement, in which the bridge closes the cycle.

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

add_arrowhead(pos: PyQt6.QtCore.QPointF) → PyQt6.QtWidgets.QAbstractGraphicsShapeItem

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

DisulfideCyclicConnectorItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

DisulfideCyclicConnectorItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

line(self) → QLineF

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

DisulfideCyclicConnectorItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

DisulfideCyclicConnectorItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

DisulfideCyclicConnectorItem.mapFromParent(self, float, float) -> QPointF

DisulfideCyclicConnectorItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

DisulfideCyclicConnectorItem.mapFromScene(self, float, float) -> QPointF

DisulfideCyclicConnectorItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

DisulfideCyclicConnectorItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

DisulfideCyclicConnectorItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

DisulfideCyclicConnectorItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

DisulfideCyclicConnectorItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

DisulfideCyclicConnectorItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

DisulfideCyclicConnectorItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

DisulfideCyclicConnectorItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

DisulfideCyclicConnectorItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

DisulfideCyclicConnectorItem.mapToParent(self, float, float) -> QPointF

DisulfideCyclicConnectorItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

DisulfideCyclicConnectorItem.mapToScene(self, float, float) -> QPointF

DisulfideCyclicConnectorItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

DisulfideCyclicConnectorItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

DisulfideCyclicConnectorItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setLine(self, QLineF)

DisulfideCyclicConnectorItem.setLine(self, float, float, float, float) -> None

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

DisulfideCyclicConnectorItem.setPos(self, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

DisulfideCyclicConnectorItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

DisulfideCyclicConnectorItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.NABackboneConnectorItem(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

Bases: schrodinger.protein.helm.helm_renderer.LineHelmConnectorItem

Graphics Item representing backbone connections between nucleotides.

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

NABackboneConnectorItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

NABackboneConnectorItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

line(self) → QLineF

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

NABackboneConnectorItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

NABackboneConnectorItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

NABackboneConnectorItem.mapFromParent(self, float, float) -> QPointF

NABackboneConnectorItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

NABackboneConnectorItem.mapFromScene(self, float, float) -> QPointF

NABackboneConnectorItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

NABackboneConnectorItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

NABackboneConnectorItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

NABackboneConnectorItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

NABackboneConnectorItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

NABackboneConnectorItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

NABackboneConnectorItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

NABackboneConnectorItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

NABackboneConnectorItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

NABackboneConnectorItem.mapToParent(self, float, float) -> QPointF

NABackboneConnectorItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

NABackboneConnectorItem.mapToScene(self, float, float) -> QPointF

NABackboneConnectorItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

NABackboneConnectorItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

NABackboneConnectorItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setLine(self, QLineF)

NABackboneConnectorItem.setLine(self, float, float, float, float) -> None

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

NABackboneConnectorItem.setPos(self, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

NABackboneConnectorItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

NABackboneConnectorItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.NABackboneBaseConnectorItem(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

Bases: schrodinger.protein.helm.helm_renderer.LineHelmConnectorItem

Graphics Item representing a connection between a nucleotide backbone and base.

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

NABackboneBaseConnectorItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

NABackboneBaseConnectorItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

line(self) → QLineF

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

NABackboneBaseConnectorItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

NABackboneBaseConnectorItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

NABackboneBaseConnectorItem.mapFromParent(self, float, float) -> QPointF

NABackboneBaseConnectorItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

NABackboneBaseConnectorItem.mapFromScene(self, float, float) -> QPointF

NABackboneBaseConnectorItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

NABackboneBaseConnectorItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

NABackboneBaseConnectorItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

NABackboneBaseConnectorItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

NABackboneBaseConnectorItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

NABackboneBaseConnectorItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

NABackboneBaseConnectorItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

NABackboneBaseConnectorItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

NABackboneBaseConnectorItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

NABackboneBaseConnectorItem.mapToParent(self, float, float) -> QPointF

NABackboneBaseConnectorItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

NABackboneBaseConnectorItem.mapToScene(self, float, float) -> QPointF

NABackboneBaseConnectorItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

NABackboneBaseConnectorItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

NABackboneBaseConnectorItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setLine(self, QLineF)

NABackboneBaseConnectorItem.setLine(self, float, float, float, float) -> None

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

NABackboneBaseConnectorItem.setPos(self, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

NABackboneBaseConnectorItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

NABackboneBaseConnectorItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.NABaseConnectorItem(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

Bases: schrodinger.protein.helm.helm_renderer.LineHelmConnectorItem

Graphics Item representing a connection between two base pairs.

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

__init__(connector: schrodinger.protein.helm.helm_renderer.HelmConnector, parent=None)

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

cacheMode(self) → QGraphicsItem.CacheMode

childItems(self) → List[QGraphicsItem]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

data(self, int) → Any

deviceTransform(self, QTransform) → QTransform

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

effectiveOpacity(self) → float

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

NABaseConnectorItem.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

filtersChildEvents(self) → bool

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

NABaseConnectorItem.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWindow(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

line(self) → QLineF

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

NABaseConnectorItem.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

NABaseConnectorItem.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

NABaseConnectorItem.mapFromParent(self, float, float) -> QPointF

NABaseConnectorItem.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

NABaseConnectorItem.mapFromScene(self, float, float) -> QPointF

NABaseConnectorItem.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

NABaseConnectorItem.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

NABaseConnectorItem.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

NABaseConnectorItem.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

NABaseConnectorItem.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

NABaseConnectorItem.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

NABaseConnectorItem.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

NABaseConnectorItem.mapToItem(self, QGraphicsItem, float, float) -> QPointF

NABaseConnectorItem.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

NABaseConnectorItem.mapToParent(self, float, float) -> QPointF

NABaseConnectorItem.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

NABaseConnectorItem.mapToScene(self, float, float) -> QPointF

NABaseConnectorItem.mapToScene(self, float, float, float, float) -> QPolygonF

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

NABaseConnectorItem.moveBy(self, float, float)

opacity(self) → float

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pen(self) → QPen

pos(self) → QPointF

prepareGeometryChange(self)

removeSceneEventFilter(self, QGraphicsItem)

resetTransform(self)

rotation(self) → float

scale(self) → float

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

NABaseConnectorItem.scroll(self, float, float, rect: QRectF = QRectF())

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setLine(self, QLineF)

NABaseConnectorItem.setLine(self, float, float, float, float) -> None

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParentItem(self, QGraphicsItem)

setPen(self, Union[QPen, QColor, Qt.GlobalColor, int, QGradient])

setPos(self, QPointF)

NABaseConnectorItem.setPos(self, float, float) -> None

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

NABaseConnectorItem.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

shape(self) → QPainterPath

show(self)

stackBefore(self, QGraphicsItem)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

NABaseConnectorItem.update(self, float, float, float, float) -> None

updateMicroFocus(self)

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

y(self) → float

zValue(self) → float

schrodinger.protein.helm.helm_renderer.connector_item_factory(connector: schrodinger.protein.helm.helm_renderer.HelmConnector) → PyQt6.QtWidgets.QAbstractGraphicsShapeItem

Implement logic specifying different graphical styles (implemented by each child class) for a connector.

Parameters

connector – Connector properties, determined by HelmScene.getConnectorData.

Returns

Graphics item to be added to the current QtWidgets.QGraphicsScene.

class schrodinger.protein.helm.helm_renderer.HelmImageOptions(background_color_hex: str, width: int, height: int)

Bases: object

background_color_hex: str

width: int

height: int

__init__(background_color_hex: str, width: int, height: int) → None

class schrodinger.protein.helm.helm_renderer.HelmFallbackImage(helm_mol: rdkit.Chem.rdchem.Mol)

Bases: PyQt6.QtSvgWidgets.QGraphicsSvgItem

GraphicsItem for the stock image (in .svg format) shown when the input polymer is too complex to display in detail, as measured by N_MONOMER_MAX

__init__(helm_mol: rdkit.Chem.rdchem.Mol)

class CacheMode(value)

Bases: enum.Enum

An enumeration.

NoCache = 0

ItemCoordinateCache = 1

DeviceCoordinateCache = 2

DeviceCoordinateCache = 2

class GraphicsItemChange(value)

Bases: enum.Enum

An enumeration.

ItemPositionChange = 0

ItemVisibleChange = 2

ItemEnabledChange = 3

ItemSelectedChange = 4

ItemParentChange = 5

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemTransformChange = 8

ItemPositionHasChanged = 9

ItemTransformHasChanged = 10

ItemSceneChange = 11

ItemVisibleHasChanged = 12

ItemEnabledHasChanged = 13

ItemSelectedHasChanged = 14

ItemParentHasChanged = 15

ItemSceneHasChanged = 16

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemZValueChange = 23

ItemZValueHasChanged = 24

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemScenePositionHasChanged = 27

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

class GraphicsItemFlag(value)

Bases: enum.Flag

An enumeration.

ItemIsMovable = 1

ItemIsSelectable = 2

ItemIsFocusable = 4

ItemClipsToShape = 8

ItemClipsChildrenToShape = 16

ItemIgnoresTransformations = 32

ItemIgnoresParentOpacity = 64

ItemDoesntPropagateOpacityToChildren = 128

ItemStacksBehindParent = 256

ItemUsesExtendedStyleOption = 512

ItemHasNoContents = 1024

ItemSendsGeometryChanges = 2048

ItemAcceptsInputMethod = 4096

ItemNegativeZStacksBehindParent = 8192

ItemIsPanel = 16384

ItemSendsScenePositionChanges = 65536

ItemContainsChildrenInShape = 524288

ItemAcceptsInputMethod = 4096

ItemChildAddedChange = 6

ItemChildRemovedChange = 7

ItemClipsChildrenToShape = 16

ItemClipsToShape = 8

ItemContainsChildrenInShape = 524288

ItemCoordinateCache = 1

ItemCursorChange = 17

ItemCursorHasChanged = 18

ItemDoesntPropagateOpacityToChildren = 128

ItemEnabledChange = 3

ItemEnabledHasChanged = 13

ItemFlagsChange = 21

ItemFlagsHaveChanged = 22

ItemHasNoContents = 1024

ItemIgnoresParentOpacity = 64

ItemIgnoresTransformations = 32

ItemIsFocusable = 4

ItemIsMovable = 1

ItemIsPanel = 16384

ItemIsSelectable = 2

ItemNegativeZStacksBehindParent = 8192

ItemOpacityChange = 25

ItemOpacityHasChanged = 26

ItemParentChange = 5

ItemParentHasChanged = 15

ItemPositionChange = 0

ItemPositionHasChanged = 9

ItemRotationChange = 28

ItemRotationHasChanged = 29

ItemScaleChange = 30

ItemScaleHasChanged = 31

ItemSceneChange = 11

ItemSceneHasChanged = 16

ItemScenePositionHasChanged = 27

ItemSelectedChange = 4

ItemSelectedHasChanged = 14

ItemSendsGeometryChanges = 2048

ItemSendsScenePositionChanges = 65536

ItemStacksBehindParent = 256

ItemToolTipChange = 19

ItemToolTipHasChanged = 20

ItemTransformChange = 8

ItemTransformHasChanged = 10

ItemTransformOriginPointChange = 32

ItemTransformOriginPointHasChanged = 33

ItemUsesExtendedStyleOption = 512

ItemVisibleChange = 2

ItemVisibleHasChanged = 12

ItemZValueChange = 23

ItemZValueHasChanged = 24

NoCache = 0

NonModal = 0

PanelModal = 1

class PanelModality(value)

Bases: enum.Enum

An enumeration.

NonModal = 0

PanelModal = 1

SceneModal = 2

SceneModal = 2

Type = 1

UserType = 65536

acceptDrops(self) → bool

acceptHoverEvents(self) → bool

acceptTouchEvents(self) → bool

acceptedMouseButtons(self) → Qt.MouseButton

advance(self, int)

blockSignals(self, bool) → bool

boundingRect(self) → QRectF

boundingRegion(self, QTransform) → QRegion

boundingRegionGranularity(self) → float

cacheMode(self) → QGraphicsItem.CacheMode

childEvent(self, QChildEvent)

childItems(self) → List[QGraphicsItem]

children(self) → List[QObject]

childrenBoundingRect(self) → QRectF

clearFocus(self)

clipPath(self) → QPainterPath

collidesWithItem(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidesWithPath(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → bool

collidingItems(self, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

commonAncestorItem(self, QGraphicsItem) → QGraphicsItem

connectNotify(self, QMetaMethod)

contains(self, QPointF) → bool

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

cursor(self) → QCursor

customEvent(self, QEvent)

data(self, int) → Any

deleteLater(self)

destroyed

destroyed(self, object: QObject = None) [signal]

deviceTransform(self, QTransform) → QTransform

disconnect(QMetaObject.Connection) → bool

disconnect(self) → None

disconnectNotify(self, QMetaMethod)

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

dropEvent(self, QGraphicsSceneDragDropEvent)

dumpObjectInfo(self)

dumpObjectTree(self)

dynamicPropertyNames(self) → List[QByteArray]

effectiveOpacity(self) → float

elementId(self) → str

enabledChanged

enabledChanged(self) [signal]

ensureVisible(self, rect: QRectF = QRectF(), xMargin: int = 50, yMargin: int = 50)

HelmFallbackImage.ensureVisible(self, float, float, float, float, xMargin: int = 50, yMargin: int = 50) -> None

event(self, QEvent) → bool

eventFilter(self, QObject, QEvent) → bool

filtersChildEvents(self) → bool

findChild(self, type, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → QObject

findChild(self, Tuple, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → QObject

findChildren(self, type, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, Tuple, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, type, QRegularExpression, options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, Tuple, QRegularExpression, options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

flags(self) → QGraphicsItem.GraphicsItemFlag

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusOutEvent(self, QFocusEvent)

focusProxy(self) → QGraphicsItem

grabGesture(self, Qt.GestureType, flags: Qt.GestureFlag = Qt.GestureFlags())

grabKeyboard(self)

grabMouse(self)

graphicsEffect(self) → QGraphicsEffect

group(self) → QGraphicsItemGroup

hasCursor(self) → bool

hasFocus(self) → bool

hide(self)

hoverEnterEvent(self, QGraphicsSceneHoverEvent)

hoverLeaveEvent(self, QGraphicsSceneHoverEvent)

hoverMoveEvent(self, QGraphicsSceneHoverEvent)

inherits(self, str) → bool

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installEventFilter(self, QObject)

installSceneEventFilter(self, QGraphicsItem)

isActive(self) → bool

isAncestorOf(self, QGraphicsItem) → bool

isBlockedByModalPanel(self) → Tuple[bool, QGraphicsItem]

isClipped(self) → bool

isEnabled(self) → bool

isObscured(self, rect: QRectF = QRectF()) → bool

HelmFallbackImage.isObscured(self, float, float, float, float) -> bool

isObscuredBy(self, QGraphicsItem) → bool

isPanel(self) → bool

isSelected(self) → bool

isSignalConnected(self, QMetaMethod) → bool

isUnderMouse(self) → bool

isVisible(self) → bool

isVisibleTo(self, QGraphicsItem) → bool

isWidget(self) → bool

isWidgetType(self) → bool

isWindow(self) → bool

isWindowType(self) → bool

itemChange(self, QGraphicsItem.GraphicsItemChange, Any) → Any

itemTransform(self, QGraphicsItem) → Tuple[QTransform, bool]

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

killTimer(self, int)

mapFromItem(self, QGraphicsItem, QPointF) → QPointF

mapFromItem(self, QGraphicsItem, QRectF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapFromItem(self, QGraphicsItem, QPainterPath) → QPainterPath

HelmFallbackImage.mapFromItem(self, QGraphicsItem, float, float) -> QPointF

HelmFallbackImage.mapFromItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapFromParent(self, QPointF) → QPointF

mapFromParent(self, QRectF) → QPolygonF

mapFromParent(self, QPolygonF) → QPolygonF

mapFromParent(self, QPainterPath) → QPainterPath

HelmFallbackImage.mapFromParent(self, float, float) -> QPointF

HelmFallbackImage.mapFromParent(self, float, float, float, float) -> QPolygonF

mapFromScene(self, QPointF) → QPointF

mapFromScene(self, QRectF) → QPolygonF

mapFromScene(self, QPolygonF) → QPolygonF

mapFromScene(self, QPainterPath) → QPainterPath

HelmFallbackImage.mapFromScene(self, float, float) -> QPointF

HelmFallbackImage.mapFromScene(self, float, float, float, float) -> QPolygonF

mapRectFromItem(self, QGraphicsItem, QRectF) → QRectF

HelmFallbackImage.mapRectFromItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectFromParent(self, QRectF) → QRectF

HelmFallbackImage.mapRectFromParent(self, float, float, float, float) -> QRectF

mapRectFromScene(self, QRectF) → QRectF

HelmFallbackImage.mapRectFromScene(self, float, float, float, float) -> QRectF

mapRectToItem(self, QGraphicsItem, QRectF) → QRectF

HelmFallbackImage.mapRectToItem(self, QGraphicsItem, float, float, float, float) -> QRectF

mapRectToParent(self, QRectF) → QRectF

HelmFallbackImage.mapRectToParent(self, float, float, float, float) -> QRectF

mapRectToScene(self, QRectF) → QRectF

HelmFallbackImage.mapRectToScene(self, float, float, float, float) -> QRectF

mapToItem(self, QGraphicsItem, QPointF) → QPointF

mapToItem(self, QGraphicsItem, QRectF) → QPolygonF

mapToItem(self, QGraphicsItem, QPolygonF) → QPolygonF

mapToItem(self, QGraphicsItem, QPainterPath) → QPainterPath

HelmFallbackImage.mapToItem(self, QGraphicsItem, float, float) -> QPointF

HelmFallbackImage.mapToItem(self, QGraphicsItem, float, float, float, float) -> QPolygonF

mapToParent(self, QPointF) → QPointF

mapToParent(self, QRectF) → QPolygonF

mapToParent(self, QPolygonF) → QPolygonF

mapToParent(self, QPainterPath) → QPainterPath

HelmFallbackImage.mapToParent(self, float, float) -> QPointF

HelmFallbackImage.mapToParent(self, float, float, float, float) -> QPolygonF

mapToScene(self, QPointF) → QPointF

mapToScene(self, QRectF) → QPolygonF

mapToScene(self, QPolygonF) → QPolygonF

mapToScene(self, QPainterPath) → QPainterPath

HelmFallbackImage.mapToScene(self, float, float) -> QPointF

HelmFallbackImage.mapToScene(self, float, float, float, float) -> QPolygonF

maximumCacheSize(self) → QSize

metaObject(self) → QMetaObject

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

HelmFallbackImage.moveBy(self, float, float)

moveToThread(self, QThread)

objectName(self) → str

objectNameChanged

objectNameChanged(self, str) [signal]

opacity(self) → float

opacityChanged

opacityChanged(self) [signal]

opaqueArea(self) → QPainterPath

paint(self, QPainter, QStyleOptionGraphicsItem, widget: QWidget = None)

panel(self) → QGraphicsItem

panelModality(self) → QGraphicsItem.PanelModality

parent(self) → QObject

parentChanged

parentChanged(self) [signal]

parentItem(self) → QGraphicsItem

parentObject(self) → QGraphicsObject

parentWidget(self) → QGraphicsWidget

pos(self) → QPointF

prepareGeometryChange(self)

property(self, str) → Any

pyqtConfigure(...)

Each keyword argument is either the name of a Qt property or a Qt signal. For properties the property is set to the given value which should be of an appropriate type. For signals the signal is connected to the given value which should be a callable.

receivers(self, PYQT_SIGNAL) → int

removeEventFilter(self, QObject)

removeSceneEventFilter(self, QGraphicsItem)

renderer(self) → QSvgRenderer

resetTransform(self)

rotation(self) → float

rotationChanged

rotationChanged(self) [signal]

scale(self) → float

scaleChanged

scaleChanged(self) [signal]

scene(self) → QGraphicsScene

sceneBoundingRect(self) → QRectF

sceneEvent(self, QEvent) → bool

sceneEventFilter(self, QGraphicsItem, QEvent) → bool

scenePos(self) → QPointF

sceneTransform(self) → QTransform

HelmFallbackImage.scroll(self, float, float, rect: QRectF = QRectF())

sender(self) → QObject

senderSignalIndex(self) → int

setAcceptDrops(self, bool)

setAcceptHoverEvents(self, bool)

setAcceptTouchEvents(self, bool)

setAcceptedMouseButtons(self, Qt.MouseButton)

setActive(self, bool)

setBoundingRegionGranularity(self, float)

setCacheMode(self, QGraphicsItem.CacheMode, logicalCacheSize: QSize = QSize())

setCursor(self, Union[QCursor, Qt.CursorShape])

setData(self, int, Any)

setElementId(self, str)

setEnabled(self, bool)

setFiltersChildEvents(self, bool)

setFlag(self, QGraphicsItem.GraphicsItemFlag, enabled: bool = True)

setFlags(self, QGraphicsItem.GraphicsItemFlag)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusProxy(self, QGraphicsItem)

setGraphicsEffect(self, QGraphicsEffect)

setGroup(self, QGraphicsItemGroup)

setInputMethodHints(self, Qt.InputMethodHint)

setMaximumCacheSize(self, QSize)

setObjectName(self, str)

setOpacity(self, float)

setPanelModality(self, QGraphicsItem.PanelModality)

setParent(self, QObject)

setParentItem(self, QGraphicsItem)

setPos(self, QPointF)

HelmFallbackImage.setPos(self, float, float) -> None

setProperty(self, str, Any) → bool

setRotation(self, float)

setScale(self, float)

setSelected(self, bool)

setSharedRenderer(self, QSvgRenderer)

setToolTip(self, str)

setTransform(self, QTransform, combine: bool = False)

setTransformOriginPoint(self, QPointF)

HelmFallbackImage.setTransformOriginPoint(self, float, float) -> None

setTransformations(self, Iterable[QGraphicsTransform])

setVisible(self, bool)

setX(self, float)

setY(self, float)

setZValue(self, float)

shape(self) → QPainterPath

show(self)

signalsBlocked(self) → bool

stackBefore(self, QGraphicsItem)

startTimer(self, int, timerType: Qt.TimerType = Qt.CoarseTimer) → int

staticMetaObject = <PyQt6.QtCore.QMetaObject object>

thread(self) → QThread

timerEvent(self, QTimerEvent)

toGraphicsObject(self) → QGraphicsObject

toolTip(self) → str

topLevelItem(self) → QGraphicsItem

topLevelWidget(self) → QGraphicsWidget

tr(str, disambiguation: str = None, n: int = - 1) → str

transform(self) → QTransform

transformOriginPoint(self) → QPointF

transformations(self) → List[QGraphicsTransform]

type(self) → int

ungrabGesture(self, Qt.GestureType)

ungrabKeyboard(self)

ungrabMouse(self)

unsetCursor(self)

update(self, rect: QRectF = QRectF())

HelmFallbackImage.update(self, float, float, float, float) -> None

updateMicroFocus(self)

visibleChanged

visibleChanged(self) [signal]

wheelEvent(self, QGraphicsSceneWheelEvent)

window(self) → QGraphicsWidget

x(self) → float

xChanged

xChanged(self) [signal]

y(self) → float

yChanged

yChanged(self) [signal]

zChanged

zChanged(self) [signal]

zValue(self) → float

class schrodinger.protein.helm.helm_renderer.HelmScene

Bases: PyQt6.QtWidgets.QGraphicsScene

Scene object for rendering a helm molecule

__init__()

setHelmMolecule(helm_mol: rdkit.Chem.rdchem.Mol)

Set the helm molecule to render and add bond and monomer representations to the scene.

Parameters

helm_mol – Helm data represented by a 2D coarse-grained molecule.

getMonomerData(monomer: rdkit.Chem.rdchem.Atom) → Tuple[int, schrodinger.protein.helm.helm_renderer.HelmMonomer]

Compute the properties of monomer needed for the logic that determines its graphical representation: the HelmMonomerItemMixin child class that monomer_item_factory should dispatch to.

Parameters

monomer – Representation of the monomer in the input rdkit molecule.

Returns

2-tuple of the index of the monomer in the conformer object and a HelmMonomer object with the needed properties.

getConnectorData(bond: rdkit.Chem.rdchem.Bond, monomer_lookup: dict) → schrodinger.protein.helm.helm_renderer.HelmConnector

Compute the properties of bond needed for the logic that determines its graphical representation: the _HelmConnectorBase child class that connector_item_factory should dispatch to.

Parameters

• bond – Representation of the connector in the input rdkit molecule.

• monomer_lookup – A dict mapping the monomer’s index in the conformer to its HelmMonomer representation.

Returns

A HelmConnector object with the needed properties.

setOptions(options: schrodinger.protein.helm.helm_renderer.HelmImageOptions)

AllLayers = 65535

BackgroundLayer = 2

BspTreeIndex = 0

ForegroundLayer = 4

class ItemIndexMethod(value)

Bases: enum.Enum

An enumeration.

BspTreeIndex = 0

NoIndex = -1

ItemLayer = 1

NoIndex = -1

class SceneLayer(value)

Bases: enum.Flag

An enumeration.

ItemLayer = 1

BackgroundLayer = 2

ForegroundLayer = 4

AllLayers = 65535

activePanel(self) → QGraphicsItem

activeWindow(self) → QGraphicsWidget

addEllipse(self, QRectF, pen: Union[QPen, QColor, Qt.GlobalColor, int, QGradient] = QPen(), brush: Union[QBrush, QColor, Qt.GlobalColor, int, QGradient] = QBrush()) → QGraphicsEllipseItem

HelmScene.addEllipse(self, float, float, float, float, pen: Union[QPen, QColor, Qt.GlobalColor, int, QGradient] = QPen(), brush: Union[QBrush, QColor, Qt.GlobalColor, int, QGradient] = QBrush()) -> QGraphicsEllipseItem

addItem(self, QGraphicsItem)

addLine(self, QLineF, pen: Union[QPen, QColor, Qt.GlobalColor, int, QGradient] = QPen()) → QGraphicsLineItem

HelmScene.addLine(self, float, float, float, float, pen: Union[QPen, QColor, Qt.GlobalColor, int, QGradient] = QPen()) -> QGraphicsLineItem

addPath(self, QPainterPath, pen: Union[QPen, QColor, Qt.GlobalColor, int, QGradient] = QPen(), brush: Union[QBrush, QColor, Qt.GlobalColor, int, QGradient] = QBrush()) → QGraphicsPathItem

addPixmap(self, QPixmap) → QGraphicsPixmapItem

addPolygon(self, QPolygonF, pen: Union[QPen, QColor, Qt.GlobalColor, int, QGradient] = QPen(), brush: Union[QBrush, QColor, Qt.GlobalColor, int, QGradient] = QBrush()) → QGraphicsPolygonItem

addRect(self, QRectF, pen: Union[QPen, QColor, Qt.GlobalColor, int, QGradient] = QPen(), brush: Union[QBrush, QColor, Qt.GlobalColor, int, QGradient] = QBrush()) → QGraphicsRectItem

HelmScene.addRect(self, float, float, float, float, pen: Union[QPen, QColor, Qt.GlobalColor, int, QGradient] = QPen(), brush: Union[QBrush, QColor, Qt.GlobalColor, int, QGradient] = QBrush()) -> QGraphicsRectItem

addSimpleText(self, str, font: QFont = QFont()) → QGraphicsSimpleTextItem

addText(self, str, font: QFont = QFont()) → QGraphicsTextItem

addWidget(self, QWidget, flags: Qt.WindowType = Qt.WindowFlags()) → QGraphicsProxyWidget

advance(self)

backgroundBrush(self) → QBrush

blockSignals(self, bool) → bool

bspTreeDepth(self) → int

changed

changed(self, Iterable[QRectF]) [signal]

childEvent(self, QChildEvent)

children(self) → List[QObject]

clear(self)

clearFocus(self)

clearSelection(self)

collidingItems(self, QGraphicsItem, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape) → List[QGraphicsItem]

connectNotify(self, QMetaMethod)

contextMenuEvent(self, QGraphicsSceneContextMenuEvent)

createItemGroup(self, Iterable[QGraphicsItem]) → QGraphicsItemGroup

customEvent(self, QEvent)

deleteLater(self)

destroyItemGroup(self, QGraphicsItemGroup)

destroyed

destroyed(self, object: QObject = None) [signal]

disconnect(QMetaObject.Connection) → bool

disconnect(self) → None

disconnectNotify(self, QMetaMethod)

dragEnterEvent(self, QGraphicsSceneDragDropEvent)

dragLeaveEvent(self, QGraphicsSceneDragDropEvent)

dragMoveEvent(self, QGraphicsSceneDragDropEvent)

drawBackground(self, QPainter, QRectF)

drawForeground(self, QPainter, QRectF)

dropEvent(self, QGraphicsSceneDragDropEvent)

dumpObjectInfo(self)

dumpObjectTree(self)

dynamicPropertyNames(self) → List[QByteArray]

event(self, QEvent) → bool

eventFilter(self, QObject, QEvent) → bool

findChild(self, type, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → QObject

findChild(self, Tuple, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → QObject

findChildren(self, type, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, Tuple, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, type, QRegularExpression, options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, Tuple, QRegularExpression, options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

focusInEvent(self, QFocusEvent)

focusItem(self) → QGraphicsItem

focusItemChanged

focusItemChanged(self, QGraphicsItem, QGraphicsItem, Qt.FocusReason) [signal]

focusNextPrevChild(self, bool) → bool

focusOnTouch(self) → bool

focusOutEvent(self, QFocusEvent)

font(self) → QFont

foregroundBrush(self) → QBrush

hasFocus(self) → bool

height(self) → float

helpEvent(self, QGraphicsSceneHelpEvent)

inherits(self, str) → bool

inputMethodEvent(self, QInputMethodEvent)

inputMethodQuery(self, Qt.InputMethodQuery) → Any

installEventFilter(self, QObject)

invalidate(self, rect: QRectF = QRectF(), layers: QGraphicsScene.SceneLayer = QGraphicsScene.AllLayers)

HelmScene.invalidate(self, float, float, float, float, layers: QGraphicsScene.SceneLayer = QGraphicsScene.AllLayers) -> None

isActive(self) → bool

isSignalConnected(self, QMetaMethod) → bool

isWidgetType(self) → bool

isWindowType(self) → bool

itemAt(self, QPointF, QTransform) → QGraphicsItem

HelmScene.itemAt(self, float, float, QTransform) -> QGraphicsItem

itemIndexMethod(self) → QGraphicsScene.ItemIndexMethod

items(self, order: Qt.SortOrder = Qt.DescendingOrder) → List[QGraphicsItem]

items(self, QPointF, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape, order: Qt.SortOrder = Qt.DescendingOrder, deviceTransform: QTransform = QTransform()) → List[QGraphicsItem]

items(self, QRectF, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape, order: Qt.SortOrder = Qt.DescendingOrder, deviceTransform: QTransform = QTransform()) → List[QGraphicsItem]

items(self, QPolygonF, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape, order: Qt.SortOrder = Qt.DescendingOrder, deviceTransform: QTransform = QTransform()) → List[QGraphicsItem]

items(self, QPainterPath, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape, order: Qt.SortOrder = Qt.DescendingOrder, deviceTransform: QTransform = QTransform()) → List[QGraphicsItem]

items(self, float, float, float, float, Qt.ItemSelectionMode, Qt.SortOrder, deviceTransform: QTransform = QTransform()) → List[QGraphicsItem]

itemsBoundingRect(self) → QRectF

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

killTimer(self, int)

metaObject(self) → QMetaObject

minimumRenderSize(self) → float

mouseDoubleClickEvent(self, QGraphicsSceneMouseEvent)

mouseGrabberItem(self) → QGraphicsItem

mouseMoveEvent(self, QGraphicsSceneMouseEvent)

mousePressEvent(self, QGraphicsSceneMouseEvent)

mouseReleaseEvent(self, QGraphicsSceneMouseEvent)

moveToThread(self, QThread)

objectName(self) → str

objectNameChanged

objectNameChanged(self, str) [signal]

palette(self) → QPalette

parent(self) → QObject

property(self, str) → Any

pyqtConfigure(...)

Each keyword argument is either the name of a Qt property or a Qt signal. For properties the property is set to the given value which should be of an appropriate type. For signals the signal is connected to the given value which should be a callable.

receivers(self, PYQT_SIGNAL) → int

removeEventFilter(self, QObject)

removeItem(self, QGraphicsItem)

render(self, QPainter, target: QRectF = QRectF(), source: QRectF = QRectF(), mode: Qt.AspectRatioMode = Qt.KeepAspectRatio)

sceneRect(self) → QRectF

sceneRectChanged

sceneRectChanged(self, QRectF) [signal]

selectedItems(self) → List[QGraphicsItem]

selectionArea(self) → QPainterPath

selectionChanged

selectionChanged(self) [signal]

sendEvent(self, QGraphicsItem, QEvent) → bool

sender(self) → QObject

senderSignalIndex(self) → int

setActivePanel(self, QGraphicsItem)

setActiveWindow(self, QGraphicsWidget)

setBackgroundBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setBspTreeDepth(self, int)

setFocus(self, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusItem(self, QGraphicsItem, focusReason: Qt.FocusReason = Qt.OtherFocusReason)

setFocusOnTouch(self, bool)

setFont(self, QFont)

setForegroundBrush(self, Union[QBrush, QColor, Qt.GlobalColor, int, QGradient])

setItemIndexMethod(self, QGraphicsScene.ItemIndexMethod)

setMinimumRenderSize(self, float)

setObjectName(self, str)

setPalette(self, QPalette)

setParent(self, QObject)

setProperty(self, str, Any) → bool

setSceneRect(self, QRectF)

HelmScene.setSceneRect(self, float, float, float, float) -> None

setSelectionArea(self, QPainterPath, QTransform)

setSelectionArea(self, QPainterPath, selectionOperation: Qt.ItemSelectionOperation = Qt.ReplaceSelection, mode: Qt.ItemSelectionMode = Qt.IntersectsItemShape, deviceTransform: QTransform = QTransform()) → None

setStickyFocus(self, bool)

setStyle(self, QStyle)

signalsBlocked(self) → bool

startTimer(self, int, timerType: Qt.TimerType = Qt.CoarseTimer) → int

staticMetaObject = <PyQt6.QtCore.QMetaObject object>

stickyFocus(self) → bool

style(self) → QStyle

thread(self) → QThread

timerEvent(self, QTimerEvent)

tr(str, disambiguation: str = None, n: int = - 1) → str

update(self, rect: QRectF = QRectF())

HelmScene.update(self, float, float, float, float) -> None

views(self) → List[QGraphicsView]

wheelEvent(self, QGraphicsSceneWheelEvent)

width(self) → float

class schrodinger.protein.helm.helm_renderer.HelmWidget(helm_mol=None, options=None, *args, **kwargs)

Bases: PyQt6.QtWidgets.QWidget

A widget which creates a visual representation of a coarse-grained 2D helm molecule

__init__(helm_mol=None, options=None, *args, **kwargs)

layout(self) → QLayout

setupView()

Set up the view for the widget

getPng()

getSvg()

DrawChildren = 2

DrawWindowBackground = 1

IgnoreMask = 4

class PaintDeviceMetric(value)

Bases: enum.Enum

An enumeration.

PdmWidth = 1

PdmHeight = 2

PdmWidthMM = 3

PdmHeightMM = 4

PdmNumColors = 5

PdmDepth = 6

PdmDpiX = 7

PdmDpiY = 8

PdmPhysicalDpiX = 9

PdmPhysicalDpiY = 10

PdmDevicePixelRatio = 11

PdmDevicePixelRatioScaled = 12

PdmDepth = 6

PdmDevicePixelRatio = 11

PdmDevicePixelRatioScaled = 12

PdmDpiX = 7

PdmDpiY = 8

PdmHeight = 2

PdmHeightMM = 4

PdmNumColors = 5

PdmPhysicalDpiX = 9

PdmPhysicalDpiY = 10

PdmWidth = 1

PdmWidthMM = 3

class RenderFlag(value)

Bases: enum.Flag

An enumeration.

DrawWindowBackground = 1

DrawChildren = 2

IgnoreMask = 4

acceptDrops(self) → bool

accessibleDescription(self) → str

accessibleName(self) → str

actionEvent(self, QActionEvent)

actions(self) → List[QAction]

activateWindow(self)

addAction(self, QAction)

addActions(self, Iterable[QAction])

adjustSize(self)

autoFillBackground(self) → bool

backgroundRole(self) → QPalette.ColorRole

baseSize(self) → QSize

blockSignals(self, bool) → bool

changeEvent(self, QEvent)

childAt(self, QPoint) → QWidget

HelmWidget.childAt(self, int, int) -> QWidget

childEvent(self, QChildEvent)

children(self) → List[QObject]

childrenRect(self) → QRect

childrenRegion(self) → QRegion

clearFocus(self)

clearMask(self)

close(self) → bool

closeEvent(self, QCloseEvent)

colorCount(self) → int

connectNotify(self, QMetaMethod)

contentsMargins(self) → QMargins

contentsRect(self) → QRect

contextMenuEvent(self, QContextMenuEvent)

contextMenuPolicy(self) → Qt.ContextMenuPolicy

create(self, window: PyQt6.sip.voidptr = 0, initializeWindow: bool = True, destroyOldWindow: bool = True)

createWindowContainer(QWindow, parent: QWidget = None, flags: Qt.WindowType = Qt.WindowFlags()) → QWidget

cursor(self) → QCursor

customContextMenuRequested

customContextMenuRequested(self, QPoint) [signal]

customEvent(self, QEvent)

deleteLater(self)

depth(self) → int

destroy(self, destroyWindow: bool = True, destroySubWindows: bool = True)

destroyed

destroyed(self, object: QObject = None) [signal]

devType(self) → int

devicePixelRatio(self) → float

devicePixelRatioF(self) → float

devicePixelRatioFScale() → float

disconnect(QMetaObject.Connection) → bool

disconnect(self) → None

disconnectNotify(self, QMetaMethod)

dragEnterEvent(self, QDragEnterEvent)

dragLeaveEvent(self, QDragLeaveEvent)

dragMoveEvent(self, QDragMoveEvent)

dropEvent(self, QDropEvent)

dumpObjectInfo(self)

dumpObjectTree(self)

dynamicPropertyNames(self) → List[QByteArray]

effectiveWinId(self) → PyQt6.sip.voidptr

ensurePolished(self)

enterEvent(self, QEnterEvent)

event(self, QEvent) → bool

eventFilter(self, QObject, QEvent) → bool

find(PyQt6.sip.voidptr) → QWidget

findChild(self, type, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → QObject

findChild(self, Tuple, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → QObject

findChildren(self, type, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, Tuple, name: str = '', options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, type, QRegularExpression, options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

findChildren(self, Tuple, QRegularExpression, options: Qt.FindChildOption = Qt.FindChildrenRecursively) → List[QObject]

focusInEvent(self, QFocusEvent)

focusNextChild(self) → bool

focusNextPrevChild(self, bool) → bool

focusOutEvent(self, QFocusEvent)

focusPolicy(self) → Qt.FocusPolicy

focusPreviousChild(self) → bool

focusProxy(self) → QWidget

focusWidget(self) → QWidget

font(self) → QFont

fontInfo(self) → QFontInfo

fontMetrics(self) → QFontMetrics

foregroundRole(self) → QPalette.ColorRole

frameGeometry(self) → QRect

frameSize(self) → QSize

geometry(self) → QRect

grab(self, rectangle: QRect = QRect(QPoint(0, 0), QSize(- 1, - 1))) → QPixmap

grabGesture(self, Qt.GestureType, flags: Qt.GestureFlag = Qt.GestureFlags())

grabKeyboard(self)

grabMouse(self)

grabMouse(self, Union[QCursor, Qt.CursorShape]) → None

grabShortcut(self, Union[QKeySequence, QKeySequence.StandardKey, str, int], context: Qt.ShortcutContext = Qt.WindowShortcut) → int

graphicsEffect(self) → QGraphicsEffect

graphicsProxyWidget(self) → QGraphicsProxyWidget

hasFocus(self) → bool

hasHeightForWidth(self) → bool

hasMouseTracking(self) → bool

hasTabletTracking(self) → bool

height(self) → int

heightForWidth(self, int) → int

heightMM(self) → int

hide(self)

hideEvent(self, QHideEvent)

inherits(self, str) → bool

initPainter(self, QPainter)

inputMethodEvent(self, QInputMethodEvent)

inputMethodHints(self) → Qt.InputMethodHint

inputMethodQuery(self, Qt.InputMethodQuery) → Any

HelmWidget.insertAction(self, QAction, QAction)

insertActions(self, QAction, Iterable[QAction])

installEventFilter(self, QObject)

isActiveWindow(self) → bool

isAncestorOf(self, QWidget) → bool

isEnabled(self) → bool

isEnabledTo(self, QWidget) → bool

isFullScreen(self) → bool

isHidden(self) → bool

isLeftToRight(self) → bool

isMaximized(self) → bool

isMinimized(self) → bool

isModal(self) → bool

isRightToLeft(self) → bool

isSignalConnected(self, QMetaMethod) → bool

isVisible(self) → bool

isVisibleTo(self, QWidget) → bool

isWidgetType(self) → bool

isWindow(self) → bool

isWindowModified(self) → bool

isWindowType(self) → bool

keyPressEvent(self, QKeyEvent)

keyReleaseEvent(self, QKeyEvent)

keyboardGrabber() → QWidget

killTimer(self, int)

layoutDirection(self) → Qt.LayoutDirection

leaveEvent(self, QEvent)

locale(self) → QLocale

logicalDpiX(self) → int

logicalDpiY(self) → int

lower(self)

mapFrom(self, QWidget, QPoint) → QPoint

mapFrom(self, QWidget, QPointF) → QPointF

mapFromGlobal(self, QPoint) → QPoint

mapFromGlobal(self, QPointF) → QPointF

mapFromParent(self, QPoint) → QPoint

mapFromParent(self, QPointF) → QPointF

mapTo(self, QWidget, QPoint) → QPoint

mapTo(self, QWidget, QPointF) → QPointF

mapToGlobal(self, QPoint) → QPoint

mapToGlobal(self, QPointF) → QPointF

mapToParent(self, QPoint) → QPoint

mapToParent(self, QPointF) → QPointF

mask(self) → QRegion

maximumHeight(self) → int

maximumSize(self) → QSize

maximumWidth(self) → int

metaObject(self) → QMetaObject

metric(self, QPaintDevice.PaintDeviceMetric) → int

minimumHeight(self) → int

minimumSize(self) → QSize

minimumSizeHint(self) → QSize

minimumWidth(self) → int

mouseDoubleClickEvent(self, QMouseEvent)

mouseGrabber() → QWidget

mouseMoveEvent(self, QMouseEvent)

mousePressEvent(self, QMouseEvent)

mouseReleaseEvent(self, QMouseEvent)

move(self, QPoint)

HelmWidget.move(self, int, int) -> None

moveEvent(self, QMoveEvent)

moveToThread(self, QThread)

nativeEvent(self, QByteArray, PyQt6.sip.voidptr) → Tuple[bool, PyQt6.sip.voidptr]

nativeParentWidget(self) → QWidget

nextInFocusChain(self) → QWidget

normalGeometry(self) → QRect

objectName(self) → str

objectNameChanged

objectNameChanged(self, str) [signal]

overrideWindowFlags(self, Qt.WindowType)

overrideWindowState(self, Qt.WindowState)

paintEngine(self) → QPaintEngine

paintEvent(self, QPaintEvent)

paintingActive(self) → bool

palette(self) → QPalette

parent(self) → QObject

parentWidget(self) → QWidget

physicalDpiX(self) → int

physicalDpiY(self) → int

pos(self) → QPoint

previousInFocusChain(self) → QWidget

property(self, str) → Any

pyqtConfigure(...)

Each keyword argument is either the name of a Qt property or a Qt signal. For properties the property is set to the given value which should be of an appropriate type. For signals the signal is connected to the given value which should be a callable.

raise_(self)

receivers(self, PYQT_SIGNAL) → int

rect(self) → QRect

releaseKeyboard(self)

releaseMouse(self)

releaseShortcut(self, int)

removeAction(self, QAction)

removeEventFilter(self, QObject)

render(self, QPaintDevice, targetOffset: QPoint = QPoint(), sourceRegion: QRegion = QRegion(), flags: QWidget.RenderFlag = QWidget.RenderFlags(QWidget.DrawWindowBackground | QWidget.DrawChildren))

render(self, QPainter, targetOffset: QPoint = QPoint(), sourceRegion: QRegion = QRegion(), flags: QWidget.RenderFlag = QWidget.RenderFlags(QWidget.DrawWindowBackground | QWidget.DrawChildren)) → None

repaint(self)

HelmWidget.repaint(self, int, int, int, int) -> None

repaint(self, QRect) → None

repaint(self, QRegion) → None

resize(self, QSize)

HelmWidget.resize(self, int, int) -> None

resizeEvent(self, QResizeEvent)

restoreGeometry(self, QByteArray) → bool

saveGeometry(self) → QByteArray

screen(self) → QScreen

HelmWidget.scroll(self, int, int)

HelmWidget.scroll(self, int, int, QRect) -> None

sender(self) → QObject

senderSignalIndex(self) → int

setAcceptDrops(self, bool)

setAccessibleDescription(self, str)

setAccessibleName(self, str)

setAttribute(self, Qt.WidgetAttribute, on: bool = True)

setAutoFillBackground(self, bool)

setBackgroundRole(self, QPalette.ColorRole)

HelmWidget.setBaseSize(self, int, int)

setBaseSize(self, QSize) → None

HelmWidget.setContentsMargins(self, int, int, int, int)

setContentsMargins(self, QMargins) → None

setContextMenuPolicy(self, Qt.ContextMenuPolicy)

setCursor(self, Union[QCursor, Qt.CursorShape])

setDisabled(self, bool)

setEnabled(self, bool)

setFixedHeight(self, int)

setFixedSize(self, QSize)

HelmWidget.setFixedSize(self, int, int) -> None

setFixedWidth(self, int)

setFocus(self)

setFocus(self, Qt.FocusReason) → None

setFocusPolicy(self, Qt.FocusPolicy)

setFocusProxy(self, QWidget)

setFont(self, QFont)

setForegroundRole(self, QPalette.ColorRole)

setGeometry(self, QRect)

HelmWidget.setGeometry(self, int, int, int, int) -> None

setGraphicsEffect(self, QGraphicsEffect)

setHidden(self, bool)

setInputMethodHints(self, Qt.InputMethodHint)

setLayout(self, QLayout)

setLayoutDirection(self, Qt.LayoutDirection)

setLocale(self, QLocale)

setMask(self, QBitmap)

setMask(self, QRegion) → None

setMaximumHeight(self, int)

HelmWidget.setMaximumSize(self, int, int)

setMaximumSize(self, QSize) → None

setMaximumWidth(self, int)

setMinimumHeight(self, int)

HelmWidget.setMinimumSize(self, int, int)

setMinimumSize(self, QSize) → None

setMinimumWidth(self, int)

setMouseTracking(self, bool)

setObjectName(self, str)

setPalette(self, QPalette)

setParent(self, QWidget)

setParent(self, QWidget, Qt.WindowType) → None

setProperty(self, str, Any) → bool

setScreen(self, QScreen)

setShortcutAutoRepeat(self, int, enabled: bool = True)

setShortcutEnabled(self, int, enabled: bool = True)

HelmWidget.setSizeIncrement(self, int, int)

setSizeIncrement(self, QSize) → None

setSizePolicy(self, QSizePolicy)

setSizePolicy(self, QSizePolicy.Policy, QSizePolicy.Policy) → None

setStatusTip(self, str)

setStyle(self, QStyle)

setStyleSheet(self, str)

HelmWidget.setTabOrder(QWidget, QWidget)

setTabletTracking(self, bool)

setToolTip(self, str)

setToolTipDuration(self, int)

setUpdatesEnabled(self, bool)

setVisible(self, bool)

setWhatsThis(self, str)

setWindowFilePath(self, str)

setWindowFlag(self, Qt.WindowType, on: bool = True)

setWindowFlags(self, Qt.WindowType)

setWindowIcon(self, QIcon)

setWindowIconText(self, str)

setWindowModality(self, Qt.WindowModality)

setWindowModified(self, bool)

setWindowOpacity(self, float)

setWindowRole(self, str)

setWindowState(self, Qt.WindowState)

setWindowTitle(self, str)

sharedPainter(self) → QPainter

show(self)

showEvent(self, QShowEvent)

showFullScreen(self)

showMaximized(self)

showMinimized(self)

showNormal(self)

signalsBlocked(self) → bool

size(self) → QSize

sizeHint(self) → QSize

sizeIncrement(self) → QSize

sizePolicy(self) → QSizePolicy

stackUnder(self, QWidget)

startTimer(self, int, timerType: Qt.TimerType = Qt.CoarseTimer) → int

staticMetaObject = <PyQt6.QtCore.QMetaObject object>

statusTip(self) → str

style(self) → QStyle

styleSheet(self) → str

tabletEvent(self, QTabletEvent)

testAttribute(self, Qt.WidgetAttribute) → bool

thread(self) → QThread

timerEvent(self, QTimerEvent)

toolTip(self) → str

toolTipDuration(self) → int

tr(str, disambiguation: str = None, n: int = - 1) → str

underMouse(self) → bool

ungrabGesture(self, Qt.GestureType)

unsetCursor(self)

unsetLayoutDirection(self)

unsetLocale(self)

update(self)

update(self, QRect) → None

update(self, QRegion) → None

HelmWidget.update(self, int, int, int, int) -> None

updateGeometry(self)

updateMicroFocus(self, query: Qt.InputMethodQuery = Qt.ImQueryAll)

updatesEnabled(self) → bool

visibleRegion(self) → QRegion

whatsThis(self) → str

wheelEvent(self, QWheelEvent)

width(self) → int

widthMM(self) → int

winId(self) → PyQt6.sip.voidptr

window(self) → QWidget

windowFilePath(self) → str

windowFlags(self) → Qt.WindowType

windowHandle(self) → QWindow

windowIcon(self) → QIcon

windowIconChanged

windowIconChanged(self, QIcon) [signal]

windowIconText(self) → str

windowIconTextChanged

windowIconTextChanged(self, str) [signal]

windowModality(self) → Qt.WindowModality

windowOpacity(self) → float

windowRole(self) → str

windowState(self) → Qt.WindowState

windowTitle(self) → str

windowTitleChanged

windowTitleChanged(self, str) [signal]

windowType(self) → Qt.WindowType

x(self) → int

y(self) → int